Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3494c

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
3,910,819	+		Rv3492c	0.73	-0.7
3,911,060	+		Rv3493c	0.16	-0.5
3,911,179	-		Rv3493c	0.32	+2.3
3,911,179	-		Rv3493c	0.32	-0.3
3,911,287	+		Rv3493c	0.47	+0.0
3,911,375	+		Rv3493c	0.59	-0.6
3,911,615	+				-0.6
3,911,616	-				-0.5
3,911,616	-				-0.4
3,911,616	-				+0.2
3,911,664	-				-0.7
3,911,677	-				-0.8
3,911,753	-				-0.8
3,911,799	+				-0.1
3,911,799	+				+1.6
3,911,799	+				-1.4
3,911,800	-				+0.7
3,911,800	-				-0.8
3,911,808	+				-1.6
3,911,808	+				-2.8
3,912,100	-		Rv3494c	0.25	-1.7
3,912,199	-		Rv3494c	0.31	-1.2
3,912,218	+		Rv3494c	0.32	-0.5
3,912,218	+		Rv3494c	0.32	-0.7
3,912,264	+		Rv3494c	0.35	-0.9
3,912,316	-		Rv3494c	0.38	-0.9
3,912,316	-		Rv3494c	0.38	-1.9
3,912,316	-		Rv3494c	0.38	-1.4
3,912,316	-		Rv3494c	0.38	+2.3
3,912,316	-		Rv3494c	0.38	-1.4
3,912,452	+		Rv3494c	0.46	-0.5
3,912,528	+		Rv3494c	0.50	-0.8
3,912,789	+		Rv3494c	0.66	-1.2
3,912,790	-		Rv3494c	0.66	+0.3
3,913,037	+		Rv3494c	0.80	-0.6
3,913,038	-		Rv3494c	0.80	-1.2
3,913,038	-		Rv3494c	0.80	-1.3
3,913,047	+		Rv3494c	0.81	+1.9
3,913,048	-		Rv3494c	0.81	-1.1
3,913,076	+		Rv3494c	0.83	-1.1
3,913,212	+				-0.3
3,913,213	-				-1.2
3,913,251	+				-1.1
3,913,288	-				-1.7
3,913,413	-				-0.1
3,913,513	+		Rv3495c	0.12	-0.7
3,913,514	-		Rv3495c	0.12	-2.8
3,913,577	+		Rv3495c	0.17	-1.2
3,913,577	+		Rv3495c	0.17	+0.1
3,913,578	-		Rv3495c	0.17	-1.0
3,913,578	-		Rv3495c	0.17	-1.1
3,913,578	-		Rv3495c	0.17	-1.2
3,913,583	-		Rv3495c	0.18	+0.3
3,913,583	-		Rv3495c	0.18	-0.0
3,913,696	+		Rv3495c	0.27	-0.9
3,914,051	+		Rv3495c	0.58	-0.8
3,914,188	-		Rv3495c	0.70	-1.0
3,914,193	+		Rv3495c	0.70	-0.4
3,914,193	+		Rv3495c	0.70	-1.5
3,914,193	+		Rv3495c	0.70	-1.2
3,914,194	-		Rv3495c	0.70	-0.8
3,914,194	-		Rv3495c	0.70	-1.4