Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3488

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
3,906,669	+		Rv3487c	0.59	-0.6
3,906,669	+		Rv3487c	0.59	+1.2
3,906,670	-		Rv3487c	0.59	-1.6
3,906,727	+		Rv3487c	0.66	-0.5
3,906,727	+		Rv3487c	0.66	-0.2
3,906,727	+		Rv3487c	0.66	-0.3
3,906,796	+		Rv3487c	0.75	-0.2
3,906,796	+		Rv3487c	0.75	-0.1
3,906,796	+		Rv3487c	0.75	+0.6
3,906,796	+		Rv3487c	0.75	-0.3
3,906,796	+		Rv3487c	0.75	+0.0
3,906,797	-		Rv3487c	0.75	-0.3
3,906,797	-		Rv3487c	0.75	+0.1
3,906,797	-		Rv3487c	0.75	-0.2
3,906,797	-		Rv3487c	0.75	-0.2
3,906,797	-		Rv3487c	0.75	+0.0
3,906,955	+				-0.3
3,906,955	+				+0.7
3,906,956	-				-0.0
3,907,036	-				+0.3
3,907,036	-				+1.1
3,907,119	+				-0.2
3,907,119	+				+0.2
3,907,120	-				-0.6
3,907,120	-				-0.2
3,907,123	+				-0.1
3,907,123	+				-0.7
3,907,139	+				-0.0
3,907,139	+				-0.3
3,907,139	+				+0.0
3,907,139	+				+0.4
3,907,139	+				-1.8
3,907,139	+				-0.2
3,907,139	+				-0.4
3,907,139	+				-0.0
3,907,139	+				-0.7
3,907,139	+				-0.3
3,907,140	-				+0.2
3,907,140	-				+0.3
3,907,140	-				-1.0
3,907,140	-				-0.8
3,907,140	-				+0.0
3,907,140	-				+1.9
3,907,140	-				-0.6
3,907,194	-				-1.0
3,907,194	-				+0.2
3,907,283	-				-0.8
3,907,283	-				+0.7
3,907,285	+				+1.0
3,907,285	+				-0.2
3,907,286	-				+1.2
3,907,383	-				-0.0
3,907,411	+				+0.3
3,907,412	-				+0.3
3,907,412	-				+0.9
3,907,415	+				-0.6
3,907,415	+				-0.1
3,907,415	+				-0.6
3,907,415	+				+0.8
3,907,416	-				+0.2
3,907,559	-				-0.1
3,907,666	+				-0.3
3,907,666	+				-0.3
3,907,667	-				-0.2
3,907,667	-				-0.2
3,907,796	+		Rv3488	0.40	-0.3
3,907,797	-		Rv3488	0.40	-1.9
3,908,061	-				-0.6
3,908,066	+				-0.7
3,908,066	+				+1.0
3,908,070	+				+1.2
3,908,070	+				-0.1
3,908,234	+				-0.4
3,908,234	+				-0.9
3,908,234	+				+0.2
3,908,234	+				-0.1
3,908,234	+				+0.7