Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3471c

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
3,887,994	+		Rv3470c	0.51	-0.0
3,887,995	-		Rv3470c	0.51	-0.1
3,888,020	+		Rv3470c	0.53	+0.6
3,888,021	-		Rv3470c	0.53	+0.9
3,888,246	-		Rv3470c	0.66	+0.1
3,888,523	+		Rv3470c	0.83	-0.0
3,888,738	-				+0.6
3,888,746	+				-0.6
3,888,863	-		Rv3471c	0.10	+1.4
3,888,866	+		Rv3471c	0.11	+0.0
3,888,910	+		Rv3471c	0.19	+0.5
3,888,910	+		Rv3471c	0.19	-0.2
3,888,910	+		Rv3471c	0.19	-0.2
3,888,911	-		Rv3471c	0.19	+0.6
3,888,911	-		Rv3471c	0.19	+0.4
3,889,393	+				-0.5
3,889,393	+				+0.7
3,889,528	+		Rv3472	0.33	-0.1
3,889,528	+		Rv3472	0.33	-0.4
3,889,536	+		Rv3472	0.34	-0.3
3,889,593	+		Rv3472	0.46	+0.0
3,889,662	+		Rv3472	0.59	+0.9
3,889,897	+				+0.1
3,889,897	+				-1.0
3,889,981	+				-0.0
3,889,982	-				-1.5
3,890,025	+				-1.0
3,890,025	+				-0.2
3,890,025	+				+0.1
3,890,026	-				-1.1
3,890,200	+		Rv3473c	0.32	-0.4
3,890,201	-		Rv3473c	0.32	+1.2
3,890,220	+		Rv3473c	0.35	-0.1
3,890,221	-		Rv3473c	0.35	+0.2
3,890,253	-		Rv3473c	0.39	-0.6
3,890,253	-		Rv3473c	0.39	+1.1
3,890,327	+		Rv3473c	0.48	-0.1
3,890,327	+		Rv3473c	0.48	-0.7
3,890,328	-		Rv3473c	0.48	+0.0