Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3079c

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
3,441,028	+		Rv3077	0.82	-0.5
3,441,140	+		Rv3077	0.88	-0.8
3,441,171	-				+2.3
3,441,278	+				-0.6
3,441,279	-				+0.1
3,441,351	-				-0.3
3,441,366	+				-0.2
3,441,367	-				-0.6
3,441,367	-				-0.1
3,441,367	-				-1.5
3,441,367	-				-0.2
3,441,626	-		Rv3078	0.68	-1.8
3,441,771	+				-0.7
3,441,772	-				-0.5
3,441,772	-				+0.5
3,441,811	-				+0.7
3,442,062	+		Rv3079c	0.35	-2.0
3,442,062	+		Rv3079c	0.35	-0.9
3,442,063	-		Rv3079c	0.35	-0.4
3,442,104	+		Rv3079c	0.40	-0.3
3,442,105	-		Rv3079c	0.40	-0.7
3,442,125	+		Rv3079c	0.43	-0.5
3,442,125	+		Rv3079c	0.43	-0.9
3,442,125	+		Rv3079c	0.43	-0.7
3,442,125	+		Rv3079c	0.43	-0.5
3,442,125	+		Rv3079c	0.43	+0.1
3,442,126	-		Rv3079c	0.43	-0.1
3,442,362	-		Rv3079c	0.71	-0.3
3,442,381	+		Rv3079c	0.74	-0.3
3,442,483	+		Rv3079c	0.86	-0.4
3,442,484	-		Rv3079c	0.86	+0.0
3,442,782	+				-0.1
3,442,998	+		Rv3080c	0.10	+0.8
3,443,198	-		Rv3080c	0.16	-1.3
3,443,458	+		Rv3080c	0.24	+0.1
3,443,460	+		Rv3080c	0.24	-1.3
3,443,461	-		Rv3080c	0.24	-0.9