Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2933

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
3,254,751	+		Rv2932	0.80	+1.7
3,254,751	+		Rv2932	0.80	+1.2
3,254,772	-		Rv2932	0.80	+1.4
3,254,772	-		Rv2932	0.80	+1.6
3,254,961	-		Rv2932	0.84	+1.7
3,255,219	-		Rv2932	0.90	+1.9
3,255,243	+				+1.1
3,255,624	-				+1.8
3,255,672	+				+1.6
3,255,672	+				+1.5
3,255,923	-				+1.6
3,255,925	+				+1.7
3,255,925	+				+1.2
3,255,926	-				+1.7
3,256,095	-				+1.4
3,256,132	-				+1.8
3,256,171	+				+1.5
3,256,171	+				+1.5
3,256,171	+				+1.6
3,256,171	+				+0.9
3,256,172	-				+1.5
3,256,172	-				+1.8
3,256,219	+				+2.6
3,256,219	+				+1.6
3,256,267	+				+1.4
3,256,267	+				+1.3
3,256,268	-				+1.5
3,256,268	-				+1.6
3,256,374	+		Rv2933	0.10	+1.8
3,256,495	+		Rv2933	0.12	+1.5
3,256,496	-		Rv2933	0.12	+0.9
3,256,767	+		Rv2933	0.16	+1.8
3,256,768	-		Rv2933	0.16	+0.7
3,256,898	-		Rv2933	0.18	+1.4
3,256,914	+		Rv2933	0.19	+1.7
3,256,981	-		Rv2933	0.20	+1.1
3,256,981	-		Rv2933	0.20	+1.6
3,257,655	-		Rv2933	0.30	+2.8
3,257,720	+		Rv2933	0.31	+2.1
3,257,851	+		Rv2933	0.33	+0.3
3,257,851	+		Rv2933	0.33	+2.1
3,257,852	-		Rv2933	0.33	+1.3
3,257,852	-		Rv2933	0.33	+2.7
3,258,143	+		Rv2933	0.37	+2.3
3,258,253	+		Rv2933	0.39	+1.4
3,258,253	+		Rv2933	0.39	+2.3
3,258,253	+		Rv2933	0.39	+1.7
3,258,254	-		Rv2933	0.39	+2.2
3,258,254	-		Rv2933	0.39	+1.2
3,258,268	+		Rv2933	0.39	+1.2
3,258,269	-		Rv2933	0.39	+0.4
3,258,269	-		Rv2933	0.39	+0.7
3,258,598	+		Rv2933	0.44	+1.8
3,258,761	+		Rv2933	0.47	+1.3
3,258,761	+		Rv2933	0.47	+1.0
3,258,910	+		Rv2933	0.49	+1.4
3,258,910	+		Rv2933	0.49	+1.2
3,259,007	+		Rv2933	0.51	+1.4
3,259,007	+		Rv2933	0.51	+1.6
3,259,198	+		Rv2933	0.53	+2.0
3,259,206	+		Rv2933	0.54	+2.4
3,259,272	-		Rv2933	0.55	+1.7
3,259,793	+		Rv2933	0.63	+1.5
3,259,839	+		Rv2933	0.63	+1.7
3,259,850	+		Rv2933	0.63	+1.2
3,259,850	+		Rv2933	0.63	+1.6
3,259,850	+		Rv2933	0.63	+2.3
3,259,851	-		Rv2933	0.63	+1.8
3,259,851	-		Rv2933	0.63	+2.1
3,259,851	-		Rv2933	0.63	+1.1
3,259,851	-		Rv2933	0.63	+2.5
3,259,951	+		Rv2933	0.65	+1.2
3,259,951	+		Rv2933	0.65	+1.5
3,259,952	-		Rv2933	0.65	+2.1
3,259,952	-		Rv2933	0.65	+1.9
3,260,099	+		Rv2933	0.67	+1.4
3,260,206	+		Rv2933	0.69	+2.0
3,260,258	-		Rv2933	0.70	+1.3
3,260,310	+		Rv2933	0.70	+2.3
3,260,311	-		Rv2933	0.70	+2.3
3,260,554	+		Rv2933	0.74	+2.6
3,260,554	+		Rv2933	0.74	+2.4
3,260,555	-		Rv2933	0.74	+0.6
3,260,982	+		Rv2933	0.81	+1.8
3,261,216	+		Rv2933	0.84	+1.8
3,262,328	+				+1.8
3,262,773	+				+1.9
3,262,821	+		Rv2934	0.10	+2.7
3,262,856	-		Rv2934	0.11	+1.3
3,262,856	-		Rv2934	0.11	+2.2
3,262,856	-		Rv2934	0.11	+1.7
3,262,859	+		Rv2934	0.11	+1.5
3,263,151	-		Rv2934	0.16	+1.1