Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2685

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
3,001,156	-		Rv2684	0.42	-0.3
3,001,421	+		Rv2684	0.63	-0.5
3,001,425	+		Rv2684	0.63	+2.7
3,001,425	+		Rv2684	0.63	+0.3
3,001,426	-		Rv2684	0.63	-0.6
3,001,426	-		Rv2684	0.63	+1.7
3,001,569	+		Rv2684	0.74	+0.5
3,001,569	+		Rv2684	0.74	-0.0
3,001,569	+		Rv2684	0.74	-2.3
3,001,912	-				-0.1
3,001,912	-				-0.4
3,001,912	-				+1.1
3,001,928	+				+0.0
3,001,929	-				-0.1
3,001,929	-				-0.4
3,002,121	+		Rv2685	0.11	-1.0
3,002,122	-		Rv2685	0.11	-0.3
3,002,218	-		Rv2685	0.18	+0.3
3,002,218	-		Rv2685	0.18	-0.1
3,002,218	-		Rv2685	0.18	-0.7
3,002,218	-		Rv2685	0.18	-0.2
3,002,359	+		Rv2685	0.29	-0.9
3,002,360	-		Rv2685	0.29	-1.3
3,002,923	+		Rv2685	0.73	-0.6
3,003,268	-				-0.3
3,003,336	-				-0.1
3,003,356	+		Rv2686c	0.10	+0.4
3,003,656	+		Rv2686c	0.50	-0.1
3,003,657	-		Rv2686c	0.50	-0.3
3,004,064	-				+0.0
3,004,213	+		Rv2687c	0.25	+0.3
3,004,214	-		Rv2687c	0.25	-0.8