Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2587c

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
2,915,746	-				-3.0
2,915,769	-				-0.2
2,915,784	+				-0.6
2,915,784	+				+0.6
2,915,784	+				-1.0
2,915,784	+				-0.3
2,915,784	+				+0.8
2,915,784	+				-0.1
2,915,784	+				-1.0
2,915,785	-				-0.6
2,915,785	-				+1.7
2,915,785	-				+0.4
2,915,785	-				+0.5
2,915,785	-				+0.5
2,915,785	-				+0.1
2,916,059	+		Rv2588c	0.61	+0.3
2,916,138	+		Rv2588c	0.84	+0.6
2,916,138	+		Rv2588c	0.84	+0.6
2,916,138	+		Rv2588c	0.84	-1.3
2,916,139	-		Rv2588c	0.84	+1.1
2,916,208	+				-0.8
2,916,209	-				-0.2
2,916,209	-				-0.5
2,916,209	-				-0.9
2,916,209	-				+0.5
2,916,215	-				-0.5
2,916,215	-				+0.2
2,916,259	+				-0.7
2,916,259	+				+2.3
2,916,313	+				-0.0
2,916,624	-		Rv2589	0.20	-0.5
2,916,651	+		Rv2589	0.22	-1.0
2,916,660	+		Rv2589	0.22	-1.1
2,916,660	+		Rv2589	0.22	-1.0
2,916,661	-		Rv2589	0.22	+0.8
2,916,661	-		Rv2589	0.22	-0.9
2,916,661	-		Rv2589	0.22	-0.8
2,916,661	-		Rv2589	0.22	+1.6
2,916,661	-		Rv2589	0.22	-2.0
2,916,661	-		Rv2589	0.22	-1.7
2,916,692	+		Rv2589	0.25	-0.5