Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2205c

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
2,468,495	-		Rv2203	0.38	+0.6
2,468,495	-		Rv2203	0.38	+0.2
2,468,511	+		Rv2203	0.40	+0.8
2,468,512	-		Rv2203	0.41	-0.3
2,468,512	-		Rv2203	0.41	-0.0
2,468,512	-		Rv2203	0.41	+0.3
2,468,512	-		Rv2203	0.41	+0.1
2,468,512	-		Rv2203	0.41	-0.1
2,468,513	+		Rv2203	0.41	+0.5
2,468,513	+		Rv2203	0.41	+0.6
2,468,588	+		Rv2203	0.52	+0.1
2,468,774	+		Rv2203	0.78	-0.0
2,468,895	-				+0.6
2,468,895	-				+0.4
2,468,895	-				-0.0
2,468,895	-				+0.6
2,468,895	-				+0.9
2,468,895	-				-0.8
2,468,895	-				+0.6
2,468,918	+				-0.3
2,468,918	+				+0.9
2,468,918	+				+0.6
2,468,919	-				+0.8
2,468,919	-				-0.5
2,468,921	+				-1.2
2,468,921	+				-0.0
2,468,930	-				-0.1
2,469,298	-				-0.0
2,469,395	-				+0.3
2,469,496	+		Rv2205c	0.10	-0.4
2,469,496	+		Rv2205c	0.10	-0.6
2,469,576	+		Rv2205c	0.18	-0.7
2,469,576	+		Rv2205c	0.18	-0.3
2,469,576	+		Rv2205c	0.18	-0.8
2,469,576	+		Rv2205c	0.18	-1.5
2,469,577	-		Rv2205c	0.18	-0.2
2,470,046	+		Rv2205c	0.61	-1.1
2,470,047	-		Rv2205c	0.61	-0.0
2,470,047	-		Rv2205c	0.61	+0.3
2,470,208	-		Rv2205c	0.76	+2.0
2,470,545	+				+1.6
2,470,545	+				-0.5
2,470,546	-				+1.0
2,470,546	-				-0.2
2,470,546	-				+2.1
2,470,571	+				-0.2
2,470,609	+				-0.3
2,470,980	-		Rv2206	0.50	-0.3
2,471,142	+		Rv2206	0.73	-1.3
2,471,142	+		Rv2206	0.73	-3.1
2,471,142	+		Rv2206	0.73	-1.2
2,471,361	+				+0.7
2,471,362	-				-2.3
2,471,362	-				-0.1