Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1842c

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
2,089,775	-				-0.6
2,089,928	+		Rv1841c	0.24	+0.4
2,089,929	-		Rv1841c	0.24	-0.0
2,090,239	+		Rv1841c	0.54	+0.4
2,090,294	+		Rv1841c	0.59	-0.2
2,090,295	-		Rv1841c	0.59	+3.3
2,090,303	+		Rv1841c	0.60	-0.3
2,090,304	-		Rv1841c	0.60	-0.2
2,090,461	+		Rv1841c	0.75	+0.4
2,090,462	-		Rv1841c	0.75	+0.0
2,090,462	-		Rv1841c	0.75	+0.3
2,090,462	-		Rv1841c	0.75	+1.5
2,090,715	-				+1.1
2,090,932	+		Rv1842c	0.16	-0.2
2,090,932	+		Rv1842c	0.16	-0.1
2,090,933	-		Rv1842c	0.16	-0.5
2,090,986	-		Rv1842c	0.20	-0.6
2,090,986	-		Rv1842c	0.20	+0.5
2,091,096	+		Rv1842c	0.28	-0.1
2,091,096	+		Rv1842c	0.28	-0.9
2,091,096	+		Rv1842c	0.28	-1.0
2,091,229	-		Rv1842c	0.37	-0.3
2,091,506	+		Rv1842c	0.58	+0.6
2,091,506	+		Rv1842c	0.58	+0.4
2,091,507	-		Rv1842c	0.58	-0.3
2,091,700	+		Rv1842c	0.72	-0.2
2,091,700	+		Rv1842c	0.72	-0.1
2,091,700	+		Rv1842c	0.72	-0.2
2,091,701	-		Rv1842c	0.72	-0.1
2,091,768	-		Rv1842c	0.77	-0.3
2,091,768	-		Rv1842c	0.77	+0.1
2,091,879	-		Rv1842c	0.85	-0.2
2,092,106	+				+2.3
2,092,107	-				-0.4
2,092,107	-				-1.6
2,092,208	+				-0.1
2,092,224	+				+0.5
2,092,225	-				-0.7
2,092,225	-				-0.0
2,092,234	-				-2.1
2,092,241	+				+0.5
2,092,242	-				-0.5
2,092,242	-				-1.9
2,092,242	-				-0.6
2,092,242	-				-0.3
2,092,362	+				+0.3
2,092,362	+				-0.2
2,092,362	+				+0.3
2,092,363	-				-2.1
2,092,363	-				+2.3
2,092,363	-				+0.0
2,092,363	-				+0.5
2,092,363	-				+0.2
2,092,363	-				-0.4
2,092,403	+		Rv1843c	0.10	+0.7
2,092,403	+		Rv1843c	0.10	-0.3
2,092,403	+		Rv1843c	0.10	+1.7
2,092,477	+		Rv1843c	0.15	-1.9
2,092,478	-		Rv1843c	0.15	+0.2
2,092,478	-		Rv1843c	0.15	-0.5
2,092,545	+		Rv1843c	0.20	-0.2
2,092,545	+		Rv1843c	0.20	-0.0
2,092,545	+		Rv1843c	0.20	-0.5
2,092,545	+		Rv1843c	0.20	-0.2
2,092,546	-		Rv1843c	0.20	-0.1
2,092,557	+		Rv1843c	0.21	-0.3
2,092,557	+		Rv1843c	0.21	+1.7
2,092,557	+		Rv1843c	0.21	+1.4
2,092,557	+		Rv1843c	0.21	+1.6
2,092,558	-		Rv1843c	0.21	+0.4
2,092,602	+		Rv1843c	0.24	+0.3
2,092,602	+		Rv1843c	0.24	+0.6
2,092,602	+		Rv1843c	0.24	+0.7
2,092,602	+		Rv1843c	0.24	+0.3
2,092,603	-		Rv1843c	0.24	-1.0
2,092,603	-		Rv1843c	0.24	+0.4
2,092,603	-		Rv1843c	0.24	+0.8
2,092,702	+		Rv1843c	0.31	-0.2
2,092,702	+		Rv1843c	0.31	-0.1
2,093,082	+		Rv1843c	0.57	+0.5
2,093,082	+		Rv1843c	0.57	+0.8
2,093,082	+		Rv1843c	0.57	-0.0
2,093,083	-		Rv1843c	0.57	+0.1
2,093,083	-		Rv1843c	0.57	+0.3
2,093,083	-		Rv1843c	0.57	+0.1