Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0932c and Rv0933 are separated by 215 nucleotides Rv0933 and Rv0934 are separated by 20 nucleotides
Rv0932c: Rv0932c - Periplasmic phosphate-binding lipoprotein PstS2 (PBP-2) (PstS2), at 1,039,936 to 1,041,048
Rv0932c
Rv0933: Rv0933 - Phosphate-transport ATP-binding protein ABC transporter PstB, at 1,041,264 to 1,042,094
Rv0933
Rv0934: Rv0934 - Periplasmic phosphate-binding lipoprotein PstS1 (PBP-1) (PstS1), at 1,042,115 to 1,043,239
Rv0934
Position (kb)
1041
1042
1043 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1040.318 kb on + strand, within Rv0932c at 1040.318 kb on + strand, within Rv0932c at 1040.319 kb on - strand, within Rv0932c at 1040.319 kb on - strand, within Rv0932c at 1040.319 kb on - strand, within Rv0932c at 1040.451 kb on - strand, within Rv0932c at 1040.497 kb on - strand, within Rv0932c at 1040.502 kb on + strand, within Rv0932c at 1040.634 kb on + strand, within Rv0932c at 1040.634 kb on + strand, within Rv0932c at 1040.635 kb on - strand, within Rv0932c at 1040.639 kb on + strand, within Rv0932c at 1040.639 kb on + strand, within Rv0932c at 1040.640 kb on - strand, within Rv0932c at 1040.640 kb on - strand, within Rv0932c at 1040.852 kb on + strand, within Rv0932c at 1040.852 kb on + strand, within Rv0932c at 1041.249 kb on + strand at 1041.249 kb on + strand at 1041.249 kb on + strand at 1041.249 kb on + strand at 1041.249 kb on + strand at 1041.249 kb on + strand at 1041.250 kb on - strand at 1041.253 kb on - strand at 1041.253 kb on - strand at 1041.253 kb on - strand at 1041.386 kb on + strand, within Rv0933 at 1041.855 kb on - strand, within Rv0933 at 1041.924 kb on - strand, within Rv0933 at 1042.109 kb on + strand at 1042.132 kb on + strand at 1042.170 kb on + strand at 1042.299 kb on - strand, within Rv0934 at 1042.436 kb on + strand, within Rv0934 at 1042.436 kb on + strand, within Rv0934 at 1042.453 kb on + strand, within Rv0934 at 1042.454 kb on - strand, within Rv0934 at 1042.514 kb on + strand, within Rv0934 at 1042.514 kb on + strand, within Rv0934 at 1042.515 kb on - strand, within Rv0934 at 1042.575 kb on - strand, within Rv0934 at 1042.706 kb on + strand, within Rv0934 at 1042.707 kb on - strand, within Rv0934 at 1042.911 kb on + strand, within Rv0934 at 1042.918 kb on + strand, within Rv0934 at 1042.919 kb on - strand, within Rv0934 at 1043.054 kb on + strand, within Rv0934 at 1043.055 kb on - strand, within Rv0934
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,040,318 + Rv0932c 0.34 +0.8 1,040,318 + Rv0932c 0.34 +0.2 1,040,319 - Rv0932c 0.34 -0.3 1,040,319 - Rv0932c 0.34 -0.1 1,040,319 - Rv0932c 0.34 -1.3 1,040,451 - Rv0932c 0.46 -0.6 1,040,497 - Rv0932c 0.50 -0.2 1,040,502 + Rv0932c 0.51 -1.0 1,040,634 + Rv0932c 0.63 -0.8 1,040,634 + Rv0932c 0.63 +0.0 1,040,635 - Rv0932c 0.63 -0.4 1,040,639 + Rv0932c 0.63 -0.4 1,040,639 + Rv0932c 0.63 -1.3 1,040,640 - Rv0932c 0.63 -0.9 1,040,640 - Rv0932c 0.63 -0.3 1,040,852 + Rv0932c 0.82 -1.3 1,040,852 + Rv0932c 0.82 -0.9 1,041,249 + +0.4 1,041,249 + +0.3 1,041,249 + -0.1 1,041,249 + +0.1 1,041,249 + -0.5 1,041,249 + -0.3 1,041,250 - +0.4 1,041,253 - -0.3 1,041,253 - +0.3 1,041,253 - +0.7 1,041,386 + Rv0933 0.15 -0.1 1,041,855 - Rv0933 0.71 +2.6 1,041,924 - Rv0933 0.79 +0.2 1,042,109 + -1.1 1,042,132 + +0.7 1,042,170 + +1.7 1,042,299 - Rv0934 0.16 -1.1 1,042,436 + Rv0934 0.29 +0.4 1,042,436 + Rv0934 0.29 -0.5 1,042,453 + Rv0934 0.30 +0.5 1,042,454 - Rv0934 0.30 +0.5 1,042,514 + Rv0934 0.35 +1.2 1,042,514 + Rv0934 0.35 -0.5 1,042,515 - Rv0934 0.36 -0.4 1,042,575 - Rv0934 0.41 -0.1 1,042,706 + Rv0934 0.53 -2.2 1,042,707 - Rv0934 0.53 -0.5 1,042,911 + Rv0934 0.71 +1.0 1,042,918 + Rv0934 0.71 +0.9 1,042,919 - Rv0934 0.71 +0.3 1,043,054 + Rv0934 0.83 +0.4 1,043,055 - Rv0934 0.84 -0.0
Or see this region's nucleotide sequence