Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS18085 and SGL_RS18090 are separated by 360 nucleotides SGL_RS18090 and SGL_RS18095 are separated by 28 nucleotides SGL_RS18095 and SGL_RS18100 are separated by 121 nucleotides
SGL_RS18085: SGL_RS18085 - molecular chaperone HtpG, at 3,514,232 to 3,516,208
_RS18085
SGL_RS18090: SGL_RS18090 - glucose-1-phosphate adenylyltransferase, at 3,516,569 to 3,517,858
_RS18090
SGL_RS18095: SGL_RS18095 - TIGR03943 family protein, at 3,517,887 to 3,518,735
_RS18095
SGL_RS18100: SGL_RS18100 - SH3 domain-containing protein, at 3,518,857 to 3,519,312
_RS18100
Position (kb)
3516
3517
3518 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 3515.653 kb on - strand, within SGL_RS18085 at 3515.688 kb on + strand, within SGL_RS18085 at 3515.693 kb on + strand, within SGL_RS18085 at 3515.694 kb on - strand, within SGL_RS18085 at 3515.694 kb on - strand, within SGL_RS18085 at 3515.734 kb on + strand, within SGL_RS18085 at 3515.768 kb on - strand, within SGL_RS18085 at 3515.785 kb on + strand, within SGL_RS18085 at 3515.837 kb on + strand, within SGL_RS18085 at 3516.292 kb on - strand at 3516.434 kb on + strand at 3516.555 kb on + strand at 3516.590 kb on + strand at 3516.781 kb on - strand, within SGL_RS18090 at 3517.374 kb on + strand, within SGL_RS18090 at 3517.955 kb on - strand at 3517.982 kb on - strand, within SGL_RS18095 at 3518.184 kb on + strand, within SGL_RS18095 at 3518.250 kb on - strand, within SGL_RS18095 at 3518.395 kb on + strand, within SGL_RS18095 at 3518.519 kb on + strand, within SGL_RS18095 at 3518.527 kb on - strand, within SGL_RS18095 at 3518.599 kb on + strand, within SGL_RS18095 at 3518.616 kb on + strand, within SGL_RS18095 at 3518.624 kb on - strand, within SGL_RS18095 at 3518.722 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 3,515,653 - SGL_RS18085 0.72 +1.8 3,515,688 + SGL_RS18085 0.74 +0.1 3,515,693 + SGL_RS18085 0.74 +1.1 3,515,694 - SGL_RS18085 0.74 +2.1 3,515,694 - SGL_RS18085 0.74 +0.7 3,515,734 + SGL_RS18085 0.76 +1.6 3,515,768 - SGL_RS18085 0.78 +1.5 3,515,785 + SGL_RS18085 0.79 +1.8 3,515,837 + SGL_RS18085 0.81 +1.7 3,516,292 - +0.1 3,516,434 + -0.1 3,516,555 + -2.7 3,516,590 + -2.4 3,516,781 - SGL_RS18090 0.16 -1.1 3,517,374 + SGL_RS18090 0.62 -2.6 3,517,955 - -3.8 3,517,982 - SGL_RS18095 0.11 -4.2 3,518,184 + SGL_RS18095 0.35 -3.8 3,518,250 - SGL_RS18095 0.43 -4.5 3,518,395 + SGL_RS18095 0.60 -2.6 3,518,519 + SGL_RS18095 0.74 -5.4 3,518,527 - SGL_RS18095 0.75 -2.6 3,518,599 + SGL_RS18095 0.84 -3.1 3,518,616 + SGL_RS18095 0.86 -2.5 3,518,624 - SGL_RS18095 0.87 -4.8 3,518,722 - -1.0
Or see this region's nucleotide sequence