Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS13385

Experiment: high light; bubbling

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS13380 and SGL_RS13385 are separated by 161 nucleotidesSGL_RS13385 and SGL_RS13390 are separated by 283 nucleotides SGL_RS13380: SGL_RS13380 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase, at 2,469,245 to 2,470,429 _RS13380 SGL_RS13385: SGL_RS13385 - fructose-bisphosphate aldolase class II, at 2,470,591 to 2,471,670 _RS13385 SGL_RS13390: SGL_RS13390 - glutamate-1-semialdehyde 2,1-aminomutase, at 2,471,954 to 2,473,255 _RS13390 Position (kb) 2470 2471 2472Strain fitness (log2 ratio) -1 0 1at 2470.475 kb on + strandat 2471.915 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction high light; bubbling
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2,470,475 + +1.2
2,471,915 + +0.4

Or see this region's nucleotide sequence