Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS13205

Experiment: high light; bubbling

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS13200 and SGL_RS13205 are separated by 130 nucleotidesSGL_RS13205 and SGL_RS13210 are separated by 251 nucleotides SGL_RS13200: SGL_RS13200 - cytochrome b6, at 2,428,010 to 2,428,678 _RS13200 SGL_RS13205: SGL_RS13205 - cytochrome b6-f complex subunit IV, at 2,428,809 to 2,429,291 _RS13205 SGL_RS13210: SGL_RS13210 - glycosyltransferase, at 2,429,543 to 2,430,964 _RS13210 Position (kb) 2428 2429 2430Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 2427.917 kb on - strandat 2428.745 kb on + strandat 2429.275 kb on - strandat 2429.337 kb on - strandat 2429.620 kb on - strandat 2429.702 kb on - strand, within SGL_RS13210

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Per-strain Table

Position Strand Gene LocusTag Fraction high light; bubbling
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2,427,917 - -4.7
2,428,745 + -3.7
2,429,275 - +5.0
2,429,337 - +0.6
2,429,620 - +0.4
2,429,702 - SGL_RS13210 0.11 +0.3

Or see this region's nucleotide sequence