Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS10645 and SGL_RS10650 are separated by 129 nucleotides SGL_RS10650 and SGL_RS10655 are separated by 4 nucleotides SGL_RS10655 and SGL_RS10660 are separated by 25 nucleotides
SGL_RS10645: SGL_RS10645 - carbamoyltransferase, at 1,856,070 to 1,857,917
_RS10645
SGL_RS10650: SGL_RS10650 - DUF2808 domain-containing protein, at 1,858,047 to 1,858,604
_RS10650
SGL_RS10655: SGL_RS10655 - FtsW/RodA/SpoVE family cell cycle protein, at 1,858,609 to 1,859,790
_RS10655
SGL_RS10660: SGL_RS10660 - gamma-glutamyltransferase, at 1,859,816 to 1,861,372
_RS10660
Position (kb) 1858
1859
1860 Strain fitness (log2 ratio) -2
-1
0
1 at 1857.671 kb on + strand, within SGL_RS10645 at 1857.856 kb on + strand at 1857.921 kb on + strand at 1857.980 kb on - strand at 1858.078 kb on + strand at 1858.117 kb on - strand, within SGL_RS10650 at 1858.290 kb on - strand, within SGL_RS10650 at 1858.492 kb on + strand, within SGL_RS10650 at 1859.286 kb on - strand, within SGL_RS10655 at 1860.010 kb on + strand, within SGL_RS10660 at 1860.012 kb on - strand, within SGL_RS10660 at 1860.322 kb on - strand, within SGL_RS10660 at 1860.398 kb on + strand, within SGL_RS10660 at 1860.579 kb on + strand, within SGL_RS10660 at 1860.582 kb on - strand, within SGL_RS10660 at 1860.644 kb on + strand, within SGL_RS10660 at 1860.688 kb on + strand, within SGL_RS10660 at 1860.689 kb on + strand, within SGL_RS10660 at 1860.694 kb on + strand, within SGL_RS10660
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 1,857,671 + SGL_RS10645 0.87 +0.1 1,857,856 + +0.6 1,857,921 + +0.5 1,857,980 - -0.3 1,858,078 + +0.0 1,858,117 - SGL_RS10650 0.13 +1.1 1,858,290 - SGL_RS10650 0.44 -0.5 1,858,492 + SGL_RS10650 0.80 -0.2 1,859,286 - SGL_RS10655 0.57 -2.0 1,860,010 + SGL_RS10660 0.12 +0.5 1,860,012 - SGL_RS10660 0.13 +0.2 1,860,322 - SGL_RS10660 0.32 +0.6 1,860,398 + SGL_RS10660 0.37 +0.6 1,860,579 + SGL_RS10660 0.49 +1.1 1,860,582 - SGL_RS10660 0.49 -0.4 1,860,644 + SGL_RS10660 0.53 +0.1 1,860,688 + SGL_RS10660 0.56 +0.5 1,860,689 + SGL_RS10660 0.56 -0.3 1,860,694 + SGL_RS10660 0.56 +0.8
Or see this region's nucleotide sequence