Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06510 and SGL_RS06515 are separated by 211 nucleotides SGL_RS06515 and SGL_RS06520 are separated by 131 nucleotides
SGL_RS06510: SGL_RS06510 - YdiU family protein, at 988,072 to 989,505
_RS06510
SGL_RS06515: SGL_RS06515 - ATP-dependent zinc metalloprotease FtsH4, at 989,717 to 991,603
_RS06515
SGL_RS06520: SGL_RS06520 - hydrogenase expression/formation protein HypE, at 991,735 to 992,772
_RS06520
Position (kb) 989
990
991
992 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 988.881 kb on - strand, within SGL_RS06510 at 989.012 kb on - strand, within SGL_RS06510 at 989.747 kb on - strand at 989.940 kb on + strand, within SGL_RS06515 at 989.948 kb on - strand, within SGL_RS06515 at 990.122 kb on - strand, within SGL_RS06515 at 990.153 kb on - strand, within SGL_RS06515 at 990.200 kb on - strand, within SGL_RS06515 at 990.200 kb on - strand, within SGL_RS06515 at 990.272 kb on - strand, within SGL_RS06515 at 990.683 kb on - strand, within SGL_RS06515 at 990.683 kb on - strand, within SGL_RS06515 at 990.683 kb on - strand, within SGL_RS06515 at 990.706 kb on + strand, within SGL_RS06515 at 991.005 kb on + strand, within SGL_RS06515 at 991.013 kb on - strand, within SGL_RS06515 at 991.013 kb on - strand, within SGL_RS06515 at 991.118 kb on + strand, within SGL_RS06515 at 991.226 kb on - strand, within SGL_RS06515 at 991.450 kb on - strand at 991.454 kb on - strand at 991.591 kb on - strand at 991.591 kb on - strand at 991.656 kb on + strand at 991.673 kb on + strand at 991.704 kb on + strand at 991.719 kb on - strand at 991.734 kb on - strand at 991.992 kb on - strand, within SGL_RS06520 at 992.016 kb on - strand, within SGL_RS06520 at 992.106 kb on + strand, within SGL_RS06520 at 992.114 kb on - strand, within SGL_RS06520 at 992.314 kb on - strand, within SGL_RS06520 at 992.347 kb on - strand, within SGL_RS06520 at 992.347 kb on - strand, within SGL_RS06520 at 992.347 kb on - strand, within SGL_RS06520 at 992.387 kb on + strand, within SGL_RS06520 at 992.400 kb on - strand, within SGL_RS06520 at 992.461 kb on + strand, within SGL_RS06520 at 992.585 kb on - strand, within SGL_RS06520
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 988,881 - SGL_RS06510 0.56 +1.0 989,012 - SGL_RS06510 0.66 -0.6 989,747 - -2.4 989,940 + SGL_RS06515 0.12 -0.8 989,948 - SGL_RS06515 0.12 -2.2 990,122 - SGL_RS06515 0.21 -0.6 990,153 - SGL_RS06515 0.23 -1.7 990,200 - SGL_RS06515 0.26 -1.1 990,200 - SGL_RS06515 0.26 -0.9 990,272 - SGL_RS06515 0.29 -1.5 990,683 - SGL_RS06515 0.51 -1.6 990,683 - SGL_RS06515 0.51 -0.8 990,683 - SGL_RS06515 0.51 -0.6 990,706 + SGL_RS06515 0.52 -0.6 991,005 + SGL_RS06515 0.68 -0.0 991,013 - SGL_RS06515 0.69 -0.9 991,013 - SGL_RS06515 0.69 +0.0 991,118 + SGL_RS06515 0.74 -1.8 991,226 - SGL_RS06515 0.80 -0.9 991,450 - +0.0 991,454 - -0.5 991,591 - -1.5 991,591 - -2.1 991,656 + -0.4 991,673 + +1.4 991,704 + +0.1 991,719 - +0.2 991,734 - -1.5 991,992 - SGL_RS06520 0.25 +0.1 992,016 - SGL_RS06520 0.27 +0.1 992,106 + SGL_RS06520 0.36 -0.6 992,114 - SGL_RS06520 0.37 -0.6 992,314 - SGL_RS06520 0.56 +0.5 992,347 - SGL_RS06520 0.59 +0.2 992,347 - SGL_RS06520 0.59 -0.0 992,347 - SGL_RS06520 0.59 +0.3 992,387 + SGL_RS06520 0.63 -0.4 992,400 - SGL_RS06520 0.64 -0.1 992,461 + SGL_RS06520 0.70 +4.1 992,585 - SGL_RS06520 0.82 +0.3
Or see this region's nucleotide sequence