Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS05085 and SGL_RS05090 are separated by 32 nucleotides SGL_RS05090 and SGL_RS05095 are separated by 106 nucleotides SGL_RS05095 and SGL_RS05100 are separated by 718 nucleotides
SGL_RS05085: SGL_RS05085 - chemotaxis protein CheW, at 690,399 to 690,866
_RS05085
SGL_RS05090: SGL_RS05090 - response regulator, at 690,899 to 691,264
_RS05090
SGL_RS05095: SGL_RS05095 - response regulator, at 691,371 to 692,492
_RS05095
SGL_RS05100: SGL_RS05100 - ribonuclease R, at 693,211 to 695,211
_RS05100
Position (kb) 691
692
693 Strain fitness (log2 ratio) -2
-1
0
1 at 690.447 kb on - strand, within SGL_RS05085 at 690.447 kb on - strand, within SGL_RS05085 at 690.447 kb on - strand, within SGL_RS05085 at 690.555 kb on - strand, within SGL_RS05085 at 690.567 kb on + strand, within SGL_RS05085 at 690.646 kb on - strand, within SGL_RS05085 at 690.684 kb on + strand, within SGL_RS05085 at 690.732 kb on + strand, within SGL_RS05085 at 690.798 kb on + strand, within SGL_RS05085 at 690.823 kb on + strand at 690.870 kb on - strand at 690.948 kb on + strand, within SGL_RS05090 at 690.956 kb on - strand, within SGL_RS05090 at 690.956 kb on - strand, within SGL_RS05090 at 690.980 kb on - strand, within SGL_RS05090 at 690.982 kb on - strand, within SGL_RS05090 at 691.238 kb on - strand at 691.386 kb on + strand at 691.405 kb on - strand at 691.556 kb on + strand, within SGL_RS05095 at 691.564 kb on - strand, within SGL_RS05095 at 691.625 kb on - strand, within SGL_RS05095 at 691.625 kb on - strand, within SGL_RS05095 at 691.728 kb on + strand, within SGL_RS05095 at 691.751 kb on - strand, within SGL_RS05095 at 691.752 kb on - strand, within SGL_RS05095 at 691.762 kb on - strand, within SGL_RS05095 at 691.777 kb on - strand, within SGL_RS05095 at 691.826 kb on + strand, within SGL_RS05095 at 691.834 kb on - strand, within SGL_RS05095 at 691.834 kb on - strand, within SGL_RS05095 at 691.918 kb on + strand, within SGL_RS05095 at 691.921 kb on - strand, within SGL_RS05095 at 691.934 kb on - strand, within SGL_RS05095 at 692.093 kb on - strand, within SGL_RS05095 at 692.169 kb on - strand, within SGL_RS05095 at 692.260 kb on - strand, within SGL_RS05095 at 692.260 kb on - strand, within SGL_RS05095 at 692.324 kb on - strand, within SGL_RS05095 at 692.444 kb on - strand at 692.484 kb on + strand at 692.530 kb on + strand at 692.534 kb on - strand at 692.554 kb on + strand at 692.617 kb on - strand at 692.670 kb on + strand at 693.074 kb on - strand at 693.284 kb on - strand at 693.284 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 690,447 - SGL_RS05085 0.10 +0.1 690,447 - SGL_RS05085 0.10 +0.3 690,447 - SGL_RS05085 0.10 +0.2 690,555 - SGL_RS05085 0.33 -0.4 690,567 + SGL_RS05085 0.36 -0.8 690,646 - SGL_RS05085 0.53 -0.9 690,684 + SGL_RS05085 0.61 -1.8 690,732 + SGL_RS05085 0.71 -0.8 690,798 + SGL_RS05085 0.85 -0.5 690,823 + -1.5 690,870 - +0.7 690,948 + SGL_RS05090 0.13 +0.4 690,956 - SGL_RS05090 0.16 +0.4 690,956 - SGL_RS05090 0.16 +0.5 690,980 - SGL_RS05090 0.22 +0.2 690,982 - SGL_RS05090 0.23 +0.8 691,238 - +0.5 691,386 + -0.4 691,405 - -1.0 691,556 + SGL_RS05095 0.16 -0.5 691,564 - SGL_RS05095 0.17 -1.1 691,625 - SGL_RS05095 0.23 +0.2 691,625 - SGL_RS05095 0.23 -0.8 691,728 + SGL_RS05095 0.32 -1.2 691,751 - SGL_RS05095 0.34 -1.5 691,752 - SGL_RS05095 0.34 -2.2 691,762 - SGL_RS05095 0.35 -1.1 691,777 - SGL_RS05095 0.36 -0.4 691,826 + SGL_RS05095 0.41 -0.7 691,834 - SGL_RS05095 0.41 -0.9 691,834 - SGL_RS05095 0.41 -1.2 691,918 + SGL_RS05095 0.49 -0.7 691,921 - SGL_RS05095 0.49 -1.2 691,934 - SGL_RS05095 0.50 -0.7 692,093 - SGL_RS05095 0.64 -1.9 692,169 - SGL_RS05095 0.71 -1.1 692,260 - SGL_RS05095 0.79 -1.9 692,260 - SGL_RS05095 0.79 -1.7 692,324 - SGL_RS05095 0.85 -0.9 692,444 - -1.9 692,484 + -0.8 692,530 + -1.5 692,534 - -1.0 692,554 + -1.3 692,617 - -0.7 692,670 + -0.1 693,074 - -0.9 693,284 - -1.4 693,284 - -1.7
Or see this region's nucleotide sequence