Experiment: medium light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14025 and SGL_RS14030 are separated by 454 nucleotides SGL_RS14030 and SGL_RS14035 are separated by 14 nucleotides SGL_RS14035 and SGL_RS14040 are separated by 189 nucleotides
SGL_RS14025: SGL_RS14025 - gamma-glutamyl-phosphate reductase, at 2,606,095 to 2,607,357
_RS14025
SGL_RS14030: SGL_RS14030 - ATP-binding protein, at 2,607,812 to 2,610,058
_RS14030
SGL_RS14035: SGL_RS14035 - response regulator, at 2,610,073 to 2,610,516
_RS14035
SGL_RS14040: SGL_RS14040 - excinuclease ABC subunit UvrB, at 2,610,706 to 2,612,715
_RS14040
Position (kb)
2607
2608
2609
2610
2611 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7
8
9 at 2606.850 kb on - strand, within SGL_RS14025 at 2606.913 kb on - strand, within SGL_RS14025 at 2607.027 kb on - strand, within SGL_RS14025 at 2607.187 kb on + strand, within SGL_RS14025 at 2607.187 kb on + strand, within SGL_RS14025 at 2607.187 kb on + strand, within SGL_RS14025 at 2607.187 kb on + strand, within SGL_RS14025 at 2607.195 kb on - strand, within SGL_RS14025 at 2607.195 kb on - strand, within SGL_RS14025 at 2607.202 kb on - strand, within SGL_RS14025 at 2607.252 kb on - strand at 2607.252 kb on - strand at 2607.264 kb on + strand at 2607.714 kb on - strand at 2607.796 kb on + strand at 2607.853 kb on + strand at 2607.890 kb on - strand at 2607.900 kb on + strand at 2607.900 kb on - strand at 2607.908 kb on - strand at 2608.039 kb on + strand, within SGL_RS14030 at 2608.072 kb on - strand, within SGL_RS14030 at 2608.183 kb on + strand, within SGL_RS14030 at 2608.183 kb on + strand, within SGL_RS14030 at 2608.191 kb on - strand, within SGL_RS14030 at 2608.228 kb on + strand, within SGL_RS14030 at 2608.238 kb on + strand, within SGL_RS14030 at 2608.354 kb on + strand, within SGL_RS14030 at 2608.417 kb on - strand, within SGL_RS14030 at 2608.528 kb on + strand, within SGL_RS14030 at 2608.583 kb on - strand, within SGL_RS14030 at 2608.608 kb on + strand, within SGL_RS14030 at 2608.659 kb on + strand, within SGL_RS14030 at 2608.695 kb on + strand, within SGL_RS14030 at 2608.918 kb on + strand, within SGL_RS14030 at 2608.981 kb on - strand, within SGL_RS14030 at 2609.232 kb on + strand, within SGL_RS14030 at 2609.239 kb on - strand, within SGL_RS14030 at 2609.588 kb on - strand, within SGL_RS14030 at 2609.645 kb on + strand, within SGL_RS14030 at 2609.829 kb on + strand, within SGL_RS14030 at 2609.854 kb on - strand at 2610.017 kb on - strand at 2610.150 kb on - strand, within SGL_RS14035 at 2610.150 kb on - strand, within SGL_RS14035 at 2610.225 kb on + strand, within SGL_RS14035 at 2610.360 kb on + strand, within SGL_RS14035
Per-strain Table
Position Strand Gene LocusTag Fraction medium light; bubbling remove 2,606,850 - SGL_RS14025 0.60 +8.6 2,606,913 - SGL_RS14025 0.65 +9.7 2,607,027 - SGL_RS14025 0.74 +8.3 2,607,187 + SGL_RS14025 0.86 +9.1 2,607,187 + SGL_RS14025 0.86 +8.4 2,607,187 + SGL_RS14025 0.86 +7.8 2,607,187 + SGL_RS14025 0.86 +7.7 2,607,195 - SGL_RS14025 0.87 +8.2 2,607,195 - SGL_RS14025 0.87 +8.7 2,607,202 - SGL_RS14025 0.88 +8.3 2,607,252 - +8.5 2,607,252 - +9.1 2,607,264 + +8.5 2,607,714 - +2.6 2,607,796 + +2.1 2,607,853 + +1.5 2,607,890 - +0.7 2,607,900 + +1.9 2,607,900 - +1.0 2,607,908 - +1.0 2,608,039 + SGL_RS14030 0.10 +1.1 2,608,072 - SGL_RS14030 0.12 +1.7 2,608,183 + SGL_RS14030 0.17 +1.0 2,608,183 + SGL_RS14030 0.17 +1.0 2,608,191 - SGL_RS14030 0.17 +0.6 2,608,228 + SGL_RS14030 0.19 +0.7 2,608,238 + SGL_RS14030 0.19 +1.8 2,608,354 + SGL_RS14030 0.24 +0.8 2,608,417 - SGL_RS14030 0.27 +0.8 2,608,528 + SGL_RS14030 0.32 -0.3 2,608,583 - SGL_RS14030 0.34 -0.2 2,608,608 + SGL_RS14030 0.35 -0.5 2,608,659 + SGL_RS14030 0.38 +1.0 2,608,695 + SGL_RS14030 0.39 -0.3 2,608,918 + SGL_RS14030 0.49 +0.8 2,608,981 - SGL_RS14030 0.52 -0.6 2,609,232 + SGL_RS14030 0.63 -1.8 2,609,239 - SGL_RS14030 0.64 +0.5 2,609,588 - SGL_RS14030 0.79 +0.4 2,609,645 + SGL_RS14030 0.82 +1.4 2,609,829 + SGL_RS14030 0.90 +0.5 2,609,854 - -0.5 2,610,017 - +0.4 2,610,150 - SGL_RS14035 0.17 +1.0 2,610,150 - SGL_RS14035 0.17 +1.1 2,610,225 + SGL_RS14035 0.34 +0.6 2,610,360 + SGL_RS14035 0.65 +1.2
Or see this region's nucleotide sequence