Experiment: medium light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS08850 and SGL_RS08855 are separated by 256 nucleotides SGL_RS08855 and SGL_RS08860 are separated by 270 nucleotides
SGL_RS08850: SGL_RS08850 - Na+/H+ antiporter, at 1,488,843 to 1,490,426
_RS08850
SGL_RS08855: SGL_RS08855 - response regulator transcription factor, at 1,490,683 to 1,491,363
_RS08855
SGL_RS08860: SGL_RS08860 - HAMP domain-containing sensor histidine kinase, at 1,491,634 to 1,492,725
_RS08860
Position (kb)
1490
1491
1492 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1489.799 kb on + strand, within SGL_RS08850 at 1489.876 kb on + strand, within SGL_RS08850 at 1490.098 kb on + strand, within SGL_RS08850 at 1490.106 kb on - strand, within SGL_RS08850 at 1490.174 kb on + strand, within SGL_RS08850 at 1490.585 kb on + strand at 1490.783 kb on - strand, within SGL_RS08855 at 1490.873 kb on + strand, within SGL_RS08855 at 1490.975 kb on - strand, within SGL_RS08855 at 1491.059 kb on + strand, within SGL_RS08855 at 1491.152 kb on + strand, within SGL_RS08855 at 1492.115 kb on - strand, within SGL_RS08860 at 1492.115 kb on - strand, within SGL_RS08860 at 1492.117 kb on - strand, within SGL_RS08860 at 1492.121 kb on + strand, within SGL_RS08860 at 1492.166 kb on - strand, within SGL_RS08860 at 1492.209 kb on + strand, within SGL_RS08860 at 1492.223 kb on + strand, within SGL_RS08860 at 1492.223 kb on + strand, within SGL_RS08860 at 1492.223 kb on + strand, within SGL_RS08860 at 1492.228 kb on + strand, within SGL_RS08860 at 1492.231 kb on - strand, within SGL_RS08860 at 1492.255 kb on - strand, within SGL_RS08860 at 1492.294 kb on + strand, within SGL_RS08860 at 1492.302 kb on - strand, within SGL_RS08860
Per-strain Table
Position Strand Gene LocusTag Fraction medium light; bubbling remove 1,489,799 + SGL_RS08850 0.60 -1.2 1,489,876 + SGL_RS08850 0.65 -0.4 1,490,098 + SGL_RS08850 0.79 -1.2 1,490,106 - SGL_RS08850 0.80 -0.2 1,490,174 + SGL_RS08850 0.84 -1.6 1,490,585 + +0.6 1,490,783 - SGL_RS08855 0.15 -2.4 1,490,873 + SGL_RS08855 0.28 -0.3 1,490,975 - SGL_RS08855 0.43 -0.4 1,491,059 + SGL_RS08855 0.55 -3.4 1,491,152 + SGL_RS08855 0.69 -0.7 1,492,115 - SGL_RS08860 0.44 -0.7 1,492,115 - SGL_RS08860 0.44 -0.5 1,492,117 - SGL_RS08860 0.44 -3.9 1,492,121 + SGL_RS08860 0.45 -0.7 1,492,166 - SGL_RS08860 0.49 -2.0 1,492,209 + SGL_RS08860 0.53 -1.5 1,492,223 + SGL_RS08860 0.54 -1.2 1,492,223 + SGL_RS08860 0.54 -0.9 1,492,223 + SGL_RS08860 0.54 +0.1 1,492,228 + SGL_RS08860 0.54 -0.5 1,492,231 - SGL_RS08860 0.55 -1.1 1,492,255 - SGL_RS08860 0.57 -3.2 1,492,294 + SGL_RS08860 0.60 -1.1 1,492,302 - SGL_RS08860 0.61 -0.5
Or see this region's nucleotide sequence