Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11420 and SGL_RS11425 are separated by 206 nucleotides SGL_RS11425 and SGL_RS11430 are separated by 113 nucleotides SGL_RS11430 and SGL_RS11435 are separated by 72 nucleotides SGL_RS11435 and SGL_RS11440 are separated by 12 nucleotides
SGL_RS11420: SGL_RS11420 - class 1 fructose-bisphosphatase, at 2,022,028 to 2,023,071
_RS11420
SGL_RS11425: SGL_RS11425 - sucrose-phosphate phosphatase, at 2,023,278 to 2,024,012
_RS11425
SGL_RS11430: SGL_RS11430 - STAS domain-containing protein, at 2,024,126 to 2,024,476
_RS11430
SGL_RS11435: SGL_RS11435 - Mini-ribonuclease 3, at 2,024,549 to 2,024,980
_RS11435
SGL_RS11440: SGL_RS11440 - 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB, at 2,024,993 to 2,026,147
_RS11440
Position (kb)
2023
2024
2025 Strain fitness (log2 ratio)
-1
0
1
2 at 2022.486 kb on - strand, within SGL_RS11420 at 2022.593 kb on + strand, within SGL_RS11420 at 2022.608 kb on + strand, within SGL_RS11420 at 2022.719 kb on + strand, within SGL_RS11420 at 2022.770 kb on - strand, within SGL_RS11420 at 2022.772 kb on + strand, within SGL_RS11420 at 2022.792 kb on + strand, within SGL_RS11420 at 2022.793 kb on - strand, within SGL_RS11420 at 2022.895 kb on - strand, within SGL_RS11420 at 2022.926 kb on - strand, within SGL_RS11420 at 2022.929 kb on + strand, within SGL_RS11420 at 2023.193 kb on + strand at 2023.193 kb on + strand at 2023.307 kb on + strand at 2023.308 kb on + strand at 2023.318 kb on + strand at 2023.439 kb on + strand, within SGL_RS11425 at 2023.443 kb on + strand, within SGL_RS11425 at 2023.465 kb on + strand, within SGL_RS11425 at 2023.509 kb on + strand, within SGL_RS11425 at 2023.874 kb on + strand, within SGL_RS11425 at 2023.915 kb on + strand, within SGL_RS11425 at 2024.555 kb on - strand at 2024.617 kb on + strand, within SGL_RS11435 at 2024.620 kb on - strand, within SGL_RS11435 at 2024.643 kb on + strand, within SGL_RS11435 at 2024.866 kb on - strand, within SGL_RS11435 at 2024.874 kb on - strand, within SGL_RS11435 at 2024.939 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 2,022,486 - SGL_RS11420 0.44 -1.1 2,022,593 + SGL_RS11420 0.54 +0.1 2,022,608 + SGL_RS11420 0.56 -0.2 2,022,719 + SGL_RS11420 0.66 -0.6 2,022,770 - SGL_RS11420 0.71 -0.1 2,022,772 + SGL_RS11420 0.71 -0.9 2,022,792 + SGL_RS11420 0.73 -0.6 2,022,793 - SGL_RS11420 0.73 -1.0 2,022,895 - SGL_RS11420 0.83 +0.0 2,022,926 - SGL_RS11420 0.86 -0.3 2,022,929 + SGL_RS11420 0.86 -1.0 2,023,193 + -0.3 2,023,193 + +0.3 2,023,307 + +0.6 2,023,308 + +0.3 2,023,318 + +0.4 2,023,439 + SGL_RS11425 0.22 +0.3 2,023,443 + SGL_RS11425 0.22 +0.2 2,023,465 + SGL_RS11425 0.25 +0.3 2,023,509 + SGL_RS11425 0.31 +0.6 2,023,874 + SGL_RS11425 0.81 +0.3 2,023,915 + SGL_RS11425 0.87 +0.9 2,024,555 - +1.7 2,024,617 + SGL_RS11435 0.16 +1.4 2,024,620 - SGL_RS11435 0.16 +1.8 2,024,643 + SGL_RS11435 0.22 +0.2 2,024,866 - SGL_RS11435 0.73 +1.9 2,024,874 - SGL_RS11435 0.75 +2.2 2,024,939 + +1.3
Or see this region's nucleotide sequence