Experiment: medium light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14830 and SGL_RS14835 are separated by 106 nucleotides SGL_RS14835 and SGL_RS14840 are separated by 85 nucleotides SGL_RS14840 and SGL_RS14845 are separated by 80 nucleotides
SGL_RS14830: SGL_RS14830 - FkbM family methyltransferase, at 2,781,403 to 2,784,447
_RS14830
SGL_RS14835: SGL_RS14835 - FkbM family methyltransferase, at 2,784,554 to 2,785,855
_RS14835
SGL_RS14840: SGL_RS14840 - class I SAM-dependent methyltransferase, at 2,785,941 to 2,786,717
_RS14840
SGL_RS14845: SGL_RS14845 - hypothetical protein, at 2,786,798 to 2,788,417
_RS14845
Position (kb)
2784
2785
2786 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2783.604 kb on - strand, within SGL_RS14830 at 2783.818 kb on - strand, within SGL_RS14830 at 2783.874 kb on + strand, within SGL_RS14830 at 2783.877 kb on - strand, within SGL_RS14830 at 2784.044 kb on + strand, within SGL_RS14830 at 2784.067 kb on - strand, within SGL_RS14830 at 2784.082 kb on - strand, within SGL_RS14830 at 2784.600 kb on - strand at 2784.718 kb on + strand, within SGL_RS14835 at 2784.838 kb on + strand, within SGL_RS14835 at 2784.919 kb on - strand, within SGL_RS14835 at 2784.941 kb on + strand, within SGL_RS14835 at 2785.193 kb on + strand, within SGL_RS14835 at 2785.437 kb on + strand, within SGL_RS14835 at 2785.450 kb on + strand, within SGL_RS14835 at 2785.477 kb on + strand, within SGL_RS14835 at 2785.544 kb on + strand, within SGL_RS14835 at 2785.608 kb on + strand, within SGL_RS14835 at 2785.633 kb on - strand, within SGL_RS14835 at 2785.701 kb on + strand, within SGL_RS14835 at 2785.943 kb on - strand at 2785.963 kb on + strand at 2786.140 kb on + strand, within SGL_RS14840 at 2786.281 kb on + strand, within SGL_RS14840 at 2786.339 kb on - strand, within SGL_RS14840 at 2786.529 kb on + strand, within SGL_RS14840 at 2786.620 kb on - strand, within SGL_RS14840
Per-strain Table
Position Strand Gene LocusTag Fraction medium light; bubbling remove 2,783,604 - SGL_RS14830 0.72 -3.3 2,783,818 - SGL_RS14830 0.79 -3.6 2,783,874 + SGL_RS14830 0.81 -3.6 2,783,877 - SGL_RS14830 0.81 -2.4 2,784,044 + SGL_RS14830 0.87 -0.8 2,784,067 - SGL_RS14830 0.87 -0.6 2,784,082 - SGL_RS14830 0.88 -2.3 2,784,600 - -3.7 2,784,718 + SGL_RS14835 0.13 -3.1 2,784,838 + SGL_RS14835 0.22 -3.8 2,784,919 - SGL_RS14835 0.28 -3.9 2,784,941 + SGL_RS14835 0.30 -2.8 2,785,193 + SGL_RS14835 0.49 -4.0 2,785,437 + SGL_RS14835 0.68 -3.0 2,785,450 + SGL_RS14835 0.69 -2.7 2,785,477 + SGL_RS14835 0.71 -5.3 2,785,544 + SGL_RS14835 0.76 -4.4 2,785,608 + SGL_RS14835 0.81 -1.7 2,785,633 - SGL_RS14835 0.83 -4.2 2,785,701 + SGL_RS14835 0.88 -1.2 2,785,943 - -2.1 2,785,963 + -1.0 2,786,140 + SGL_RS14840 0.26 -0.2 2,786,281 + SGL_RS14840 0.44 -0.7 2,786,339 - SGL_RS14840 0.51 -1.4 2,786,529 + SGL_RS14840 0.76 -1.4 2,786,620 - SGL_RS14840 0.87 -1.2
Or see this region's nucleotide sequence