Experiment: medium light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14030 and SGL_RS14035 are separated by 14 nucleotides SGL_RS14035 and SGL_RS14040 are separated by 189 nucleotides SGL_RS14040 and SGL_RS14045 are separated by 191 nucleotides SGL_RS14045 and SGL_RS14050 are separated by 163 nucleotides
SGL_RS14030: SGL_RS14030 - ATP-binding protein, at 2,607,812 to 2,610,058
_RS14030
SGL_RS14035: SGL_RS14035 - response regulator, at 2,610,073 to 2,610,516
_RS14035
SGL_RS14040: SGL_RS14040 - excinuclease ABC subunit UvrB, at 2,610,706 to 2,612,715
_RS14040
SGL_RS14045: SGL_RS14045 - hypothetical protein, at 2,612,907 to 2,613,317
_RS14045
SGL_RS14050: SGL_RS14050 - photosystem II reaction center X protein, at 2,613,481 to 2,613,600
_RS14050
Position (kb)
2610
2611
2612
2613 Strain fitness (log2 ratio)
-1
0
1 at 2609.829 kb on + strand, within SGL_RS14030 at 2609.854 kb on - strand at 2610.017 kb on - strand at 2610.150 kb on - strand, within SGL_RS14035 at 2610.150 kb on - strand, within SGL_RS14035 at 2610.225 kb on + strand, within SGL_RS14035 at 2610.360 kb on + strand, within SGL_RS14035 at 2611.238 kb on + strand, within SGL_RS14040 at 2611.244 kb on - strand, within SGL_RS14040 at 2611.328 kb on + strand, within SGL_RS14040 at 2611.517 kb on - strand, within SGL_RS14040 at 2611.560 kb on - strand, within SGL_RS14040 at 2611.683 kb on + strand, within SGL_RS14040 at 2612.281 kb on - strand, within SGL_RS14040 at 2612.301 kb on + strand, within SGL_RS14040 at 2612.309 kb on - strand, within SGL_RS14040 at 2612.457 kb on - strand, within SGL_RS14040 at 2612.558 kb on + strand at 2612.795 kb on - strand at 2612.940 kb on - strand at 2613.057 kb on - strand, within SGL_RS14045 at 2613.069 kb on + strand, within SGL_RS14045 at 2613.216 kb on + strand, within SGL_RS14045 at 2613.224 kb on - strand, within SGL_RS14045 at 2613.224 kb on - strand, within SGL_RS14045 at 2613.315 kb on - strand at 2613.688 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction medium light; bubbling remove 2,609,829 + SGL_RS14030 0.90 +0.5 2,609,854 - +0.1 2,610,017 - +0.4 2,610,150 - SGL_RS14035 0.17 +0.7 2,610,150 - SGL_RS14035 0.17 +1.2 2,610,225 + SGL_RS14035 0.34 -0.1 2,610,360 + SGL_RS14035 0.65 -1.2 2,611,238 + SGL_RS14040 0.26 +0.9 2,611,244 - SGL_RS14040 0.27 +0.2 2,611,328 + SGL_RS14040 0.31 -1.1 2,611,517 - SGL_RS14040 0.40 +0.6 2,611,560 - SGL_RS14040 0.42 +0.5 2,611,683 + SGL_RS14040 0.49 +0.8 2,612,281 - SGL_RS14040 0.78 +0.7 2,612,301 + SGL_RS14040 0.79 -0.2 2,612,309 - SGL_RS14040 0.80 +0.5 2,612,457 - SGL_RS14040 0.87 +1.4 2,612,558 + +0.8 2,612,795 - +0.1 2,612,940 - -0.1 2,613,057 - SGL_RS14045 0.36 -1.0 2,613,069 + SGL_RS14045 0.39 +0.0 2,613,216 + SGL_RS14045 0.75 -0.3 2,613,224 - SGL_RS14045 0.77 +0.7 2,613,224 - SGL_RS14045 0.77 +0.4 2,613,315 - +1.5 2,613,688 - -1.0
Or see this region's nucleotide sequence