Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS12505

Experiment: medium light; bubbling

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS20040 and SGL_RS12505 are separated by 228 nucleotidesSGL_RS12505 and SGL_RS12510 are separated by 446 nucleotides SGL_RS20040: SGL_RS20040 - M23 family metallopeptidase, at 2,262,202 to 2,262,576 _RS20040 SGL_RS12505: SGL_RS12505 - ribosome-associated translation inhibitor RaiA, at 2,262,805 to 2,263,380 _RS12505 SGL_RS12510: SGL_RS12510 - lipoyl(octanoyl) transferase LipB, at 2,263,827 to 2,264,510 _RS12510 Position (kb) 2262 2263 2264Strain fitness (log2 ratio) -3 -2 -1 0 1at 2262.825 kb on + strandat 2262.854 kb on + strandat 2263.185 kb on - strand, within SGL_RS12505

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Per-strain Table

Position Strand Gene LocusTag Fraction medium light; bubbling
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2,262,825 + -0.0
2,262,854 + +0.5
2,263,185 - SGL_RS12505 0.66 -3.3

Or see this region's nucleotide sequence