Experiment: medium light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11760 and SGL_RS11765 are separated by 80 nucleotides SGL_RS11765 and SGL_RS11770 are separated by 221 nucleotides SGL_RS11770 and SGL_RS11775 are separated by 47 nucleotides
SGL_RS11760: SGL_RS11760 - radical SAM protein, at 2,090,026 to 2,091,630
_RS11760
SGL_RS11765: SGL_RS11765 - hypothetical protein, at 2,091,711 to 2,092,178
_RS11765
SGL_RS11770: SGL_RS11770 - tRNA-Asn, at 2,092,400 to 2,092,471
_RS11770
SGL_RS11775: SGL_RS11775 - isoaspartyl peptidase/L-asparaginase, at 2,092,519 to 2,093,508
_RS11775
Position (kb)
2091
2092
2093 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2090.715 kb on + strand, within SGL_RS11760 at 2090.796 kb on - strand, within SGL_RS11760 at 2090.840 kb on - strand, within SGL_RS11760 at 2091.494 kb on - strand at 2091.495 kb on - strand at 2091.601 kb on - strand at 2091.621 kb on - strand at 2091.763 kb on + strand, within SGL_RS11765 at 2091.818 kb on - strand, within SGL_RS11765 at 2091.863 kb on - strand, within SGL_RS11765 at 2091.980 kb on + strand, within SGL_RS11765 at 2092.005 kb on + strand, within SGL_RS11765 at 2092.013 kb on - strand, within SGL_RS11765 at 2092.086 kb on + strand, within SGL_RS11765 at 2092.263 kb on + strand at 2092.307 kb on + strand at 2092.659 kb on - strand, within SGL_RS11775 at 2092.678 kb on + strand, within SGL_RS11775 at 2092.790 kb on - strand, within SGL_RS11775 at 2092.833 kb on + strand, within SGL_RS11775 at 2092.836 kb on - strand, within SGL_RS11775 at 2092.903 kb on + strand, within SGL_RS11775 at 2092.918 kb on + strand, within SGL_RS11775 at 2092.918 kb on + strand, within SGL_RS11775 at 2092.923 kb on + strand, within SGL_RS11775
Per-strain Table
Position Strand Gene LocusTag Fraction medium light; bubbling remove 2,090,715 + SGL_RS11760 0.43 -0.7 2,090,796 - SGL_RS11760 0.48 -3.5 2,090,840 - SGL_RS11760 0.51 -3.5 2,091,494 - -3.2 2,091,495 - -3.3 2,091,601 - -3.8 2,091,621 - -2.5 2,091,763 + SGL_RS11765 0.11 -2.1 2,091,818 - SGL_RS11765 0.23 -3.3 2,091,863 - SGL_RS11765 0.32 -2.4 2,091,980 + SGL_RS11765 0.57 -3.9 2,092,005 + SGL_RS11765 0.63 -4.2 2,092,013 - SGL_RS11765 0.65 -0.8 2,092,086 + SGL_RS11765 0.80 -1.3 2,092,263 + -2.1 2,092,307 + +1.4 2,092,659 - SGL_RS11775 0.14 +1.3 2,092,678 + SGL_RS11775 0.16 +1.0 2,092,790 - SGL_RS11775 0.27 -0.7 2,092,833 + SGL_RS11775 0.32 +1.5 2,092,836 - SGL_RS11775 0.32 -0.9 2,092,903 + SGL_RS11775 0.39 +1.2 2,092,918 + SGL_RS11775 0.40 +1.3 2,092,918 + SGL_RS11775 0.40 +1.6 2,092,923 + SGL_RS11775 0.41 +1.3
Or see this region's nucleotide sequence