Experiment: medium light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06810 and SGL_RS06815 are separated by 200 nucleotides SGL_RS06815 and SGL_RS06820 are separated by 26 nucleotides SGL_RS06820 and SGL_RS06825 are separated by 5 nucleotides SGL_RS06825 and SGL_RS06830 are separated by 20 nucleotides
SGL_RS06810: SGL_RS06810 - 1,4-dihydroxy-2-naphthoyl-CoA synthase, at 1,052,927 to 1,053,754
_RS06810
SGL_RS06815: SGL_RS06815 - Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha, at 1,053,955 to 1,055,547
_RS06815
SGL_RS06820: SGL_RS06820 - hypothetical protein, at 1,055,574 to 1,056,113
_RS06820
SGL_RS06825: SGL_RS06825 - nucleotidyltransferase family protein, at 1,056,119 to 1,056,466
_RS06825
SGL_RS06830: SGL_RS06830 - type II toxin-antitoxin system HicA family toxin, at 1,056,487 to 1,056,717
_RS06830
Position (kb)
1053
1054
1055
1056 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1053.093 kb on - strand, within SGL_RS06810 at 1053.492 kb on + strand, within SGL_RS06810 at 1053.794 kb on - strand at 1053.796 kb on + strand at 1053.804 kb on + strand at 1053.804 kb on - strand at 1053.804 kb on - strand at 1053.852 kb on - strand at 1053.882 kb on + strand at 1054.067 kb on - strand at 1054.371 kb on + strand, within SGL_RS06815 at 1054.488 kb on - strand, within SGL_RS06815 at 1054.497 kb on + strand, within SGL_RS06815 at 1054.574 kb on + strand, within SGL_RS06815 at 1054.575 kb on - strand, within SGL_RS06815 at 1054.771 kb on + strand, within SGL_RS06815 at 1054.855 kb on + strand, within SGL_RS06815 at 1054.886 kb on - strand, within SGL_RS06815 at 1055.164 kb on - strand, within SGL_RS06815 at 1055.168 kb on + strand, within SGL_RS06815 at 1055.168 kb on + strand, within SGL_RS06815 at 1055.260 kb on + strand, within SGL_RS06815 at 1055.313 kb on - strand, within SGL_RS06815 at 1055.353 kb on + strand, within SGL_RS06815 at 1055.358 kb on + strand, within SGL_RS06815 at 1055.365 kb on + strand, within SGL_RS06815 at 1055.974 kb on + strand, within SGL_RS06820
Per-strain Table
Position Strand Gene LocusTag Fraction medium light; bubbling remove 1,053,093 - SGL_RS06810 0.20 +0.9 1,053,492 + SGL_RS06810 0.68 +1.9 1,053,794 - -0.0 1,053,796 + -0.6 1,053,804 + -0.8 1,053,804 - -0.6 1,053,804 - -0.2 1,053,852 - -2.5 1,053,882 + +0.2 1,054,067 - +1.1 1,054,371 + SGL_RS06815 0.26 -1.7 1,054,488 - SGL_RS06815 0.33 +0.2 1,054,497 + SGL_RS06815 0.34 -1.4 1,054,574 + SGL_RS06815 0.39 +0.6 1,054,575 - SGL_RS06815 0.39 +3.7 1,054,771 + SGL_RS06815 0.51 -1.2 1,054,855 + SGL_RS06815 0.56 -0.0 1,054,886 - SGL_RS06815 0.58 -0.4 1,055,164 - SGL_RS06815 0.76 +0.2 1,055,168 + SGL_RS06815 0.76 +0.1 1,055,168 + SGL_RS06815 0.76 -0.6 1,055,260 + SGL_RS06815 0.82 -0.3 1,055,313 - SGL_RS06815 0.85 +1.0 1,055,353 + SGL_RS06815 0.88 +0.7 1,055,358 + SGL_RS06815 0.88 +0.7 1,055,365 + SGL_RS06815 0.89 -0.3 1,055,974 + SGL_RS06820 0.74 +1.1
Or see this region's nucleotide sequence