Experiment: medium light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS03655 and SGL_RS03660 are separated by 134 nucleotides SGL_RS03660 and SGL_RS03665 are separated by 17 nucleotides SGL_RS03665 and SGL_RS03670 are separated by 52 nucleotides
SGL_RS03655: SGL_RS03655 - glycosyltransferase family 2 protein, at 373,654 to 374,511
_RS03655
SGL_RS03660: SGL_RS03660 - bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG, at 374,646 to 375,452
_RS03660
SGL_RS03665: SGL_RS03665 - GDP-mannose 4,6-dehydratase, at 375,470 to 376,432
_RS03665
SGL_RS03670: SGL_RS03670 - glycosyltransferase, at 376,485 to 377,639
_RS03670
Position (kb) 375
376
377 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 374.546 kb on + strand at 375.389 kb on - strand at 375.636 kb on + strand, within SGL_RS03665 at 375.735 kb on + strand, within SGL_RS03665 at 375.930 kb on - strand, within SGL_RS03665 at 376.084 kb on + strand, within SGL_RS03665 at 376.128 kb on - strand, within SGL_RS03665 at 376.158 kb on + strand, within SGL_RS03665 at 376.159 kb on - strand, within SGL_RS03665 at 376.161 kb on - strand, within SGL_RS03665 at 376.218 kb on - strand, within SGL_RS03665 at 376.321 kb on + strand, within SGL_RS03665 at 376.387 kb on - strand at 376.536 kb on + strand at 376.884 kb on - strand, within SGL_RS03670 at 376.888 kb on + strand, within SGL_RS03670 at 376.910 kb on - strand, within SGL_RS03670 at 377.193 kb on - strand, within SGL_RS03670
Per-strain Table
Position Strand Gene LocusTag Fraction medium light; bubbling remove 374,546 + +0.4 375,389 - +0.2 375,636 + SGL_RS03665 0.17 -2.0 375,735 + SGL_RS03665 0.28 -1.0 375,930 - SGL_RS03665 0.48 -1.9 376,084 + SGL_RS03665 0.64 -2.6 376,128 - SGL_RS03665 0.68 -2.7 376,158 + SGL_RS03665 0.71 -2.0 376,159 - SGL_RS03665 0.72 -1.4 376,161 - SGL_RS03665 0.72 -2.9 376,218 - SGL_RS03665 0.78 -3.7 376,321 + SGL_RS03665 0.88 -3.4 376,387 - -1.7 376,536 + -4.1 376,884 - SGL_RS03670 0.35 -3.3 376,888 + SGL_RS03670 0.35 -4.5 376,910 - SGL_RS03670 0.37 -6.4 377,193 - SGL_RS03670 0.61 -0.8
Or see this region's nucleotide sequence