Experiment: Zinc 15 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS17510 and SGL_RS17515 are separated by 42 nucleotides SGL_RS17515 and SGL_RS17520 are separated by 283 nucleotides SGL_RS17520 and SGL_RS17530 are separated by 228 nucleotides SGL_RS17530 and SGL_RS17535 are separated by 68 nucleotides
SGL_RS17510: SGL_RS17510 - hypothetical protein, at 3,385,642 to 3,385,962
_RS17510
SGL_RS17515: SGL_RS17515 - SMC-Scp complex subunit ScpB, at 3,386,005 to 3,386,493
_RS17515
SGL_RS17520: SGL_RS17520 - DUF3352 domain-containing protein, at 3,386,777 to 3,388,465
_RS17520
SGL_RS17530: SGL_RS17530 - DUF2231 domain-containing protein, at 3,388,694 to 3,389,326
_RS17530
SGL_RS17535: SGL_RS17535 - DUF2231 domain-containing protein, at 3,389,395 to 3,389,883
_RS17535
Position (kb)
3386
3387
3388
3389 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3385.821 kb on + strand, within SGL_RS17510 at 3385.917 kb on + strand, within SGL_RS17510 at 3386.029 kb on - strand at 3386.091 kb on + strand, within SGL_RS17515 at 3386.091 kb on + strand, within SGL_RS17515 at 3386.110 kb on - strand, within SGL_RS17515 at 3386.133 kb on + strand, within SGL_RS17515 at 3386.267 kb on - strand, within SGL_RS17515 at 3386.743 kb on + strand at 3387.227 kb on - strand, within SGL_RS17520 at 3387.257 kb on - strand, within SGL_RS17520 at 3387.355 kb on - strand, within SGL_RS17520 at 3387.370 kb on + strand, within SGL_RS17520 at 3387.448 kb on + strand, within SGL_RS17520 at 3387.636 kb on - strand, within SGL_RS17520 at 3387.637 kb on + strand, within SGL_RS17520 at 3387.871 kb on - strand, within SGL_RS17520 at 3387.930 kb on + strand, within SGL_RS17520 at 3388.065 kb on + strand, within SGL_RS17520 at 3388.089 kb on + strand, within SGL_RS17520 at 3388.100 kb on - strand, within SGL_RS17520 at 3388.119 kb on - strand, within SGL_RS17520 at 3388.504 kb on + strand at 3388.504 kb on + strand at 3388.528 kb on + strand at 3388.528 kb on + strand at 3388.528 kb on + strand at 3388.536 kb on - strand at 3388.598 kb on + strand at 3388.649 kb on + strand at 3388.667 kb on - strand at 3388.759 kb on - strand, within SGL_RS17530 at 3388.761 kb on + strand, within SGL_RS17530 at 3388.790 kb on + strand, within SGL_RS17530 at 3388.800 kb on - strand, within SGL_RS17530 at 3389.002 kb on - strand, within SGL_RS17530 at 3389.091 kb on + strand, within SGL_RS17530 at 3389.096 kb on + strand, within SGL_RS17530 at 3389.099 kb on - strand, within SGL_RS17530 at 3389.104 kb on - strand, within SGL_RS17530 at 3389.266 kb on + strand at 3389.274 kb on - strand at 3389.328 kb on - strand at 3389.400 kb on + strand at 3389.436 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 15 uM remove 3,385,821 + SGL_RS17510 0.56 -0.2 3,385,917 + SGL_RS17510 0.86 -0.2 3,386,029 - -1.5 3,386,091 + SGL_RS17515 0.18 -1.7 3,386,091 + SGL_RS17515 0.18 -1.7 3,386,110 - SGL_RS17515 0.21 -1.4 3,386,133 + SGL_RS17515 0.26 -0.1 3,386,267 - SGL_RS17515 0.54 -1.4 3,386,743 + -2.2 3,387,227 - SGL_RS17520 0.27 -1.7 3,387,257 - SGL_RS17520 0.28 -0.1 3,387,355 - SGL_RS17520 0.34 -3.1 3,387,370 + SGL_RS17520 0.35 -1.1 3,387,448 + SGL_RS17520 0.40 -3.2 3,387,636 - SGL_RS17520 0.51 -3.4 3,387,637 + SGL_RS17520 0.51 -5.5 3,387,871 - SGL_RS17520 0.65 -2.7 3,387,930 + SGL_RS17520 0.68 -2.9 3,388,065 + SGL_RS17520 0.76 -2.4 3,388,089 + SGL_RS17520 0.78 -3.2 3,388,100 - SGL_RS17520 0.78 -3.5 3,388,119 - SGL_RS17520 0.79 -2.7 3,388,504 + +0.1 3,388,504 + +0.9 3,388,528 + +0.4 3,388,528 + +0.0 3,388,528 + -0.7 3,388,536 - -0.1 3,388,598 + -0.5 3,388,649 + +0.2 3,388,667 - +0.4 3,388,759 - SGL_RS17530 0.10 -1.7 3,388,761 + SGL_RS17530 0.11 +0.2 3,388,790 + SGL_RS17530 0.15 -0.0 3,388,800 - SGL_RS17530 0.17 -0.5 3,389,002 - SGL_RS17530 0.49 +0.2 3,389,091 + SGL_RS17530 0.63 +0.4 3,389,096 + SGL_RS17530 0.64 +0.2 3,389,099 - SGL_RS17530 0.64 +0.4 3,389,104 - SGL_RS17530 0.65 +0.2 3,389,266 + -0.2 3,389,274 - +0.3 3,389,328 - -0.1 3,389,400 + +0.1 3,389,436 + -0.1
Or see this region's nucleotide sequence