Experiment: Zinc 15 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS15695 and SGL_RS15700 are separated by 274 nucleotides SGL_RS15700 and SGL_RS15705 are separated by 47 nucleotides
SGL_RS15695: SGL_RS15695 - ammonium transporter, at 2,969,677 to 2,971,200
_RS15695
SGL_RS15700: SGL_RS15700 - bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase, at 2,971,475 to 2,972,167
_RS15700
SGL_RS15705: SGL_RS15705 - hypothetical protein, at 2,972,215 to 2,973,222
_RS15705
Position (kb)
2971
2972
2973 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2970.485 kb on + strand, within SGL_RS15695 at 2970.534 kb on + strand, within SGL_RS15695 at 2970.555 kb on - strand, within SGL_RS15695 at 2970.652 kb on + strand, within SGL_RS15695 at 2970.693 kb on - strand, within SGL_RS15695 at 2970.771 kb on - strand, within SGL_RS15695 at 2970.876 kb on - strand, within SGL_RS15695 at 2970.932 kb on + strand, within SGL_RS15695 at 2970.933 kb on + strand, within SGL_RS15695 at 2970.933 kb on + strand, within SGL_RS15695 at 2970.940 kb on - strand, within SGL_RS15695 at 2971.582 kb on + strand, within SGL_RS15700 at 2971.631 kb on + strand, within SGL_RS15700 at 2971.643 kb on + strand, within SGL_RS15700 at 2971.676 kb on + strand, within SGL_RS15700 at 2971.683 kb on + strand, within SGL_RS15700 at 2971.701 kb on + strand, within SGL_RS15700 at 2971.811 kb on - strand, within SGL_RS15700 at 2971.839 kb on + strand, within SGL_RS15700 at 2971.917 kb on - strand, within SGL_RS15700 at 2971.977 kb on - strand, within SGL_RS15700 at 2972.008 kb on - strand, within SGL_RS15700 at 2972.046 kb on - strand, within SGL_RS15700 at 2972.114 kb on - strand at 2972.212 kb on + strand at 2972.212 kb on + strand at 2972.254 kb on + strand at 2972.262 kb on - strand at 2972.268 kb on - strand at 2972.309 kb on - strand at 2972.443 kb on + strand, within SGL_RS15705 at 2972.527 kb on - strand, within SGL_RS15705 at 2972.540 kb on + strand, within SGL_RS15705 at 2972.540 kb on + strand, within SGL_RS15705 at 2972.540 kb on + strand, within SGL_RS15705 at 2972.596 kb on - strand, within SGL_RS15705 at 2972.596 kb on - strand, within SGL_RS15705 at 2972.596 kb on - strand, within SGL_RS15705 at 2972.630 kb on - strand, within SGL_RS15705 at 2972.634 kb on + strand, within SGL_RS15705 at 2972.637 kb on - strand, within SGL_RS15705 at 2972.637 kb on - strand, within SGL_RS15705 at 2972.660 kb on - strand, within SGL_RS15705 at 2972.689 kb on + strand, within SGL_RS15705 at 2972.702 kb on + strand, within SGL_RS15705 at 2972.702 kb on + strand, within SGL_RS15705 at 2972.702 kb on + strand, within SGL_RS15705 at 2972.710 kb on - strand, within SGL_RS15705 at 2972.715 kb on + strand, within SGL_RS15705 at 2972.723 kb on - strand, within SGL_RS15705 at 2972.738 kb on - strand, within SGL_RS15705 at 2972.742 kb on + strand, within SGL_RS15705 at 2972.785 kb on - strand, within SGL_RS15705 at 2972.885 kb on - strand, within SGL_RS15705 at 2972.913 kb on + strand, within SGL_RS15705 at 2972.961 kb on - strand, within SGL_RS15705 at 2973.034 kb on - strand, within SGL_RS15705 at 2973.058 kb on + strand, within SGL_RS15705 at 2973.134 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 15 uM remove 2,970,485 + SGL_RS15695 0.53 -1.5 2,970,534 + SGL_RS15695 0.56 -1.2 2,970,555 - SGL_RS15695 0.58 -2.4 2,970,652 + SGL_RS15695 0.64 -2.0 2,970,693 - SGL_RS15695 0.67 -0.5 2,970,771 - SGL_RS15695 0.72 -1.3 2,970,876 - SGL_RS15695 0.79 -1.4 2,970,932 + SGL_RS15695 0.82 -1.9 2,970,933 + SGL_RS15695 0.82 -0.8 2,970,933 + SGL_RS15695 0.82 -0.4 2,970,940 - SGL_RS15695 0.83 -1.2 2,971,582 + SGL_RS15700 0.15 -2.0 2,971,631 + SGL_RS15700 0.23 -2.4 2,971,643 + SGL_RS15700 0.24 -1.9 2,971,676 + SGL_RS15700 0.29 -4.5 2,971,683 + SGL_RS15700 0.30 -2.6 2,971,701 + SGL_RS15700 0.33 -2.4 2,971,811 - SGL_RS15700 0.48 -3.2 2,971,839 + SGL_RS15700 0.53 -3.2 2,971,917 - SGL_RS15700 0.64 -2.8 2,971,977 - SGL_RS15700 0.72 -2.1 2,972,008 - SGL_RS15700 0.77 -1.6 2,972,046 - SGL_RS15700 0.82 -4.0 2,972,114 - -0.1 2,972,212 + +0.3 2,972,212 + +0.5 2,972,254 + -0.1 2,972,262 - +0.1 2,972,268 - -0.5 2,972,309 - +0.9 2,972,443 + SGL_RS15705 0.23 -0.5 2,972,527 - SGL_RS15705 0.31 -0.0 2,972,540 + SGL_RS15705 0.32 +0.1 2,972,540 + SGL_RS15705 0.32 -0.1 2,972,540 + SGL_RS15705 0.32 +0.1 2,972,596 - SGL_RS15705 0.38 -0.1 2,972,596 - SGL_RS15705 0.38 -0.2 2,972,596 - SGL_RS15705 0.38 +0.3 2,972,630 - SGL_RS15705 0.41 +1.2 2,972,634 + SGL_RS15705 0.42 +0.2 2,972,637 - SGL_RS15705 0.42 +0.3 2,972,637 - SGL_RS15705 0.42 -0.1 2,972,660 - SGL_RS15705 0.44 -0.1 2,972,689 + SGL_RS15705 0.47 -0.0 2,972,702 + SGL_RS15705 0.48 -0.5 2,972,702 + SGL_RS15705 0.48 -0.2 2,972,702 + SGL_RS15705 0.48 +1.6 2,972,710 - SGL_RS15705 0.49 +0.6 2,972,715 + SGL_RS15705 0.50 +0.1 2,972,723 - SGL_RS15705 0.50 +0.1 2,972,738 - SGL_RS15705 0.52 -0.0 2,972,742 + SGL_RS15705 0.52 -0.1 2,972,785 - SGL_RS15705 0.57 -0.4 2,972,885 - SGL_RS15705 0.66 +0.1 2,972,913 + SGL_RS15705 0.69 -0.1 2,972,961 - SGL_RS15705 0.74 +1.1 2,973,034 - SGL_RS15705 0.81 -0.3 2,973,058 + SGL_RS15705 0.84 -0.0 2,973,134 - -0.4
Or see this region's nucleotide sequence