Experiment: Zinc 15 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS15360 and SGL_RS15365 are separated by 8 nucleotides SGL_RS15365 and SGL_RS15370 are separated by 117 nucleotides SGL_RS15370 and SGL_RS15375 are separated by 28 nucleotides SGL_RS15375 and SGL_RS15380 are separated by 161 nucleotides
SGL_RS15360: SGL_RS15360 - aldehyde dehydrogenase family protein, at 2,898,710 to 2,900,080
_RS15360
SGL_RS15365: SGL_RS15365 - TIGR04283 family arsenosugar biosynthesis glycosyltransferase, at 2,900,089 to 2,900,862
_RS15365
SGL_RS15370: SGL_RS15370 - DnaJ C-terminal domain-containing protein, at 2,900,980 to 2,901,978
_RS15370
SGL_RS15375: SGL_RS15375 - class I SAM-dependent methyltransferase, at 2,902,007 to 2,902,669
_RS15375
SGL_RS15380: SGL_RS15380 - SulP family inorganic anion transporter, at 2,902,831 to 2,904,501
_RS15380
Position (kb)
2900
2901
2902 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2900.093 kb on - strand at 2900.249 kb on + strand, within SGL_RS15365 at 2900.256 kb on - strand, within SGL_RS15365 at 2900.260 kb on + strand, within SGL_RS15365 at 2900.312 kb on - strand, within SGL_RS15365 at 2900.708 kb on + strand, within SGL_RS15365 at 2900.796 kb on - strand at 2900.848 kb on - strand at 2900.866 kb on + strand at 2900.877 kb on + strand at 2900.877 kb on + strand at 2900.877 kb on + strand at 2900.879 kb on - strand at 2900.886 kb on - strand at 2901.145 kb on + strand, within SGL_RS15370 at 2901.221 kb on + strand, within SGL_RS15370 at 2901.248 kb on + strand, within SGL_RS15370 at 2901.256 kb on - strand, within SGL_RS15370 at 2901.333 kb on + strand, within SGL_RS15370 at 2901.424 kb on + strand, within SGL_RS15370 at 2901.429 kb on + strand, within SGL_RS15370 at 2901.462 kb on - strand, within SGL_RS15370 at 2901.583 kb on + strand, within SGL_RS15370 at 2901.584 kb on - strand, within SGL_RS15370 at 2901.763 kb on + strand, within SGL_RS15370 at 2901.805 kb on + strand, within SGL_RS15370 at 2901.821 kb on + strand, within SGL_RS15370 at 2902.153 kb on - strand, within SGL_RS15375 at 2902.280 kb on + strand, within SGL_RS15375 at 2902.288 kb on + strand, within SGL_RS15375 at 2902.334 kb on - strand, within SGL_RS15375 at 2902.442 kb on + strand, within SGL_RS15375 at 2902.512 kb on + strand, within SGL_RS15375 at 2902.636 kb on + strand at 2902.721 kb on + strand at 2902.772 kb on + strand at 2902.785 kb on - strand at 2902.835 kb on + strand at 2902.936 kb on + strand at 2902.943 kb on - strand at 2902.949 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 15 uM remove 2,900,093 - -0.0 2,900,249 + SGL_RS15365 0.21 -0.6 2,900,256 - SGL_RS15365 0.22 +0.0 2,900,260 + SGL_RS15365 0.22 +0.3 2,900,312 - SGL_RS15365 0.29 +0.2 2,900,708 + SGL_RS15365 0.80 +0.1 2,900,796 - +0.1 2,900,848 - -0.2 2,900,866 + +0.5 2,900,877 + +0.4 2,900,877 + -0.3 2,900,877 + +0.4 2,900,879 - -0.2 2,900,886 - +0.1 2,901,145 + SGL_RS15370 0.17 -3.9 2,901,221 + SGL_RS15370 0.24 -3.0 2,901,248 + SGL_RS15370 0.27 -4.0 2,901,256 - SGL_RS15370 0.28 -2.0 2,901,333 + SGL_RS15370 0.35 -1.6 2,901,424 + SGL_RS15370 0.44 -4.3 2,901,429 + SGL_RS15370 0.45 -0.3 2,901,462 - SGL_RS15370 0.48 -0.1 2,901,583 + SGL_RS15370 0.60 -5.4 2,901,584 - SGL_RS15370 0.60 -4.8 2,901,763 + SGL_RS15370 0.78 -1.6 2,901,805 + SGL_RS15370 0.83 -1.5 2,901,821 + SGL_RS15370 0.84 -4.3 2,902,153 - SGL_RS15375 0.22 +0.5 2,902,280 + SGL_RS15375 0.41 +0.1 2,902,288 + SGL_RS15375 0.42 +0.3 2,902,334 - SGL_RS15375 0.49 +0.1 2,902,442 + SGL_RS15375 0.66 -0.3 2,902,512 + SGL_RS15375 0.76 +0.1 2,902,636 + +0.5 2,902,721 + +0.2 2,902,772 + -0.0 2,902,785 - +0.5 2,902,835 + -0.0 2,902,936 + +0.4 2,902,943 - -0.1 2,902,949 + -0.1
Or see this region's nucleotide sequence