Experiment: Zinc 15 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14855 and SGL_RS14860 are separated by 293 nucleotides SGL_RS14860 and SGL_RS14865 are separated by 157 nucleotides SGL_RS14865 and SGL_RS14870 are separated by 5 nucleotides
SGL_RS14855: SGL_RS14855 - group I intron-associated PD-(D/E)XK endonuclease, at 2,791,074 to 2,791,526
_RS14855
SGL_RS14860: SGL_RS14860 - 8-amino-7-oxononanoate synthase, at 2,791,820 to 2,793,001
_RS14860
SGL_RS14865: SGL_RS14865 - type I methionyl aminopeptidase, at 2,793,159 to 2,793,920
_RS14865
SGL_RS14870: SGL_RS14870 - thiol-disulfide oxidoreductase DCC family protein, at 2,793,926 to 2,794,381
_RS14870
Position (kb)
2791
2792
2793
2794 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2790.872 kb on - strand at 2791.633 kb on - strand at 2791.786 kb on + strand at 2792.025 kb on - strand, within SGL_RS14860 at 2792.075 kb on - strand, within SGL_RS14860 at 2792.228 kb on - strand, within SGL_RS14860 at 2792.501 kb on - strand, within SGL_RS14860 at 2792.542 kb on + strand, within SGL_RS14860 at 2792.555 kb on - strand, within SGL_RS14860 at 2792.560 kb on - strand, within SGL_RS14860 at 2792.560 kb on - strand, within SGL_RS14860 at 2792.560 kb on - strand, within SGL_RS14860 at 2792.643 kb on + strand, within SGL_RS14860 at 2792.806 kb on + strand, within SGL_RS14860 at 2792.932 kb on + strand at 2792.946 kb on + strand at 2793.026 kb on - strand at 2793.065 kb on + strand at 2793.177 kb on - strand at 2793.231 kb on + strand at 2793.481 kb on - strand, within SGL_RS14865 at 2793.850 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 15 uM remove 2,790,872 - +0.2 2,791,633 - -2.0 2,791,786 + +0.0 2,792,025 - SGL_RS14860 0.17 -2.2 2,792,075 - SGL_RS14860 0.22 -3.7 2,792,228 - SGL_RS14860 0.35 -1.8 2,792,501 - SGL_RS14860 0.58 -1.8 2,792,542 + SGL_RS14860 0.61 -4.2 2,792,555 - SGL_RS14860 0.62 -1.8 2,792,560 - SGL_RS14860 0.63 -2.3 2,792,560 - SGL_RS14860 0.63 -3.3 2,792,560 - SGL_RS14860 0.63 -3.8 2,792,643 + SGL_RS14860 0.70 -1.4 2,792,806 + SGL_RS14860 0.83 -1.6 2,792,932 + -3.9 2,792,946 + -3.5 2,793,026 - +0.4 2,793,065 + +1.5 2,793,177 - -0.5 2,793,231 + +0.3 2,793,481 - SGL_RS14865 0.42 +0.2 2,793,850 - -1.3
Or see this region's nucleotide sequence