Experiment: Zinc 15 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS13845 and SGL_RS13850 are separated by 157 nucleotides SGL_RS13850 and SGL_RS13855 are separated by 93 nucleotides SGL_RS13855 and SGL_RS13860 are separated by 99 nucleotides SGL_RS13860 and SGL_RS13865 are separated by 229 nucleotides
SGL_RS13845: SGL_RS13845 - NACHT domain-containing protein, at 2,569,772 to 2,573,491
_RS13845
SGL_RS13850: SGL_RS13850 - glutathione S-transferase family protein, at 2,573,649 to 2,574,203
_RS13850
SGL_RS13855: SGL_RS13855 - hypothetical protein, at 2,574,297 to 2,575,244
_RS13855
SGL_RS13860: SGL_RS13860 - acetolactate synthase small subunit, at 2,575,344 to 2,575,862
_RS13860
SGL_RS13865: SGL_RS13865 - DUF3285 domain-containing protein, at 2,576,092 to 2,576,280
_RS13865
Position (kb)
2574
2575
2576 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2573.495 kb on - strand at 2573.520 kb on - strand at 2573.623 kb on - strand at 2573.640 kb on + strand at 2573.647 kb on + strand at 2573.687 kb on + strand at 2573.694 kb on + strand at 2573.768 kb on - strand, within SGL_RS13850 at 2573.903 kb on - strand, within SGL_RS13850 at 2573.906 kb on + strand, within SGL_RS13850 at 2573.914 kb on - strand, within SGL_RS13850 at 2573.944 kb on + strand, within SGL_RS13850 at 2573.944 kb on + strand, within SGL_RS13850 at 2573.944 kb on + strand, within SGL_RS13850 at 2573.944 kb on + strand, within SGL_RS13850 at 2574.019 kb on + strand, within SGL_RS13850 at 2574.100 kb on + strand, within SGL_RS13850 at 2574.107 kb on + strand, within SGL_RS13850 at 2574.143 kb on - strand, within SGL_RS13850 at 2574.593 kb on - strand, within SGL_RS13855 at 2574.718 kb on + strand, within SGL_RS13855 at 2574.763 kb on - strand, within SGL_RS13855 at 2575.096 kb on + strand, within SGL_RS13855 at 2575.104 kb on - strand, within SGL_RS13855 at 2575.248 kb on - strand at 2575.273 kb on + strand at 2575.283 kb on + strand at 2575.604 kb on + strand, within SGL_RS13860 at 2576.003 kb on - strand at 2576.178 kb on + strand, within SGL_RS13865 at 2576.180 kb on + strand, within SGL_RS13865 at 2576.186 kb on - strand, within SGL_RS13865 at 2576.188 kb on - strand, within SGL_RS13865
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 15 uM remove 2,573,495 - +0.3 2,573,520 - +0.5 2,573,623 - -0.0 2,573,640 + +0.2 2,573,647 + -0.1 2,573,687 + +0.0 2,573,694 + +0.5 2,573,768 - SGL_RS13850 0.21 +0.3 2,573,903 - SGL_RS13850 0.46 -0.1 2,573,906 + SGL_RS13850 0.46 +0.1 2,573,914 - SGL_RS13850 0.48 -0.4 2,573,944 + SGL_RS13850 0.53 -0.6 2,573,944 + SGL_RS13850 0.53 -0.5 2,573,944 + SGL_RS13850 0.53 +0.3 2,573,944 + SGL_RS13850 0.53 +0.2 2,574,019 + SGL_RS13850 0.67 -0.4 2,574,100 + SGL_RS13850 0.81 -0.3 2,574,107 + SGL_RS13850 0.83 -0.2 2,574,143 - SGL_RS13850 0.89 -0.1 2,574,593 - SGL_RS13855 0.31 -2.2 2,574,718 + SGL_RS13855 0.44 -1.6 2,574,763 - SGL_RS13855 0.49 -2.5 2,575,096 + SGL_RS13855 0.84 -2.2 2,575,104 - SGL_RS13855 0.85 -2.3 2,575,248 - -2.5 2,575,273 + -2.0 2,575,283 + -2.4 2,575,604 + SGL_RS13860 0.50 -2.9 2,576,003 - -0.6 2,576,178 + SGL_RS13865 0.46 +0.0 2,576,180 + SGL_RS13865 0.47 +0.3 2,576,186 - SGL_RS13865 0.50 -0.4 2,576,188 - SGL_RS13865 0.51 +0.0
Or see this region's nucleotide sequence