Experiment: Zinc 15 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11125 and SGL_RS11130 are separated by 107 nucleotides SGL_RS11130 and SGL_RS11135 are separated by 78 nucleotides SGL_RS11135 and SGL_RS11140 are separated by 110 nucleotides
SGL_RS11125: SGL_RS11125 - 50S ribosomal protein L21, at 1,957,758 to 1,958,132
_RS11125
SGL_RS11130: SGL_RS11130 - 50S ribosomal protein L27, at 1,958,240 to 1,958,503
_RS11130
SGL_RS11135: SGL_RS11135 - D-alanyl-D-alanine dipeptidase DdpX, at 1,958,582 to 1,959,325
_RS11135
SGL_RS11140: SGL_RS11140 - citramalate synthase, at 1,959,436 to 1,961,079
_RS11140
Position (kb)
1958
1959
1960 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1958.127 kb on + strand at 1958.686 kb on - strand, within SGL_RS11135 at 1958.849 kb on - strand, within SGL_RS11135 at 1959.290 kb on - strand at 1959.546 kb on + strand at 1959.738 kb on - strand, within SGL_RS11140 at 1959.792 kb on - strand, within SGL_RS11140 at 1959.792 kb on - strand, within SGL_RS11140 at 1959.840 kb on - strand, within SGL_RS11140 at 1959.845 kb on - strand, within SGL_RS11140 at 1959.878 kb on + strand, within SGL_RS11140 at 1959.908 kb on - strand, within SGL_RS11140 at 1959.994 kb on + strand, within SGL_RS11140 at 1959.994 kb on + strand, within SGL_RS11140 at 1959.994 kb on + strand, within SGL_RS11140 at 1960.059 kb on - strand, within SGL_RS11140 at 1960.120 kb on + strand, within SGL_RS11140 at 1960.158 kb on - strand, within SGL_RS11140 at 1960.260 kb on - strand, within SGL_RS11140
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 15 uM remove 1,958,127 + +0.2 1,958,686 - SGL_RS11135 0.14 -4.0 1,958,849 - SGL_RS11135 0.36 -2.1 1,959,290 - -1.4 1,959,546 + +0.1 1,959,738 - SGL_RS11140 0.18 +0.2 1,959,792 - SGL_RS11140 0.22 -0.3 1,959,792 - SGL_RS11140 0.22 -0.2 1,959,840 - SGL_RS11140 0.25 +0.2 1,959,845 - SGL_RS11140 0.25 +0.2 1,959,878 + SGL_RS11140 0.27 +0.0 1,959,908 - SGL_RS11140 0.29 +0.0 1,959,994 + SGL_RS11140 0.34 -0.1 1,959,994 + SGL_RS11140 0.34 +0.1 1,959,994 + SGL_RS11140 0.34 -0.3 1,960,059 - SGL_RS11140 0.38 +0.1 1,960,120 + SGL_RS11140 0.42 +0.3 1,960,158 - SGL_RS11140 0.44 -1.3 1,960,260 - SGL_RS11140 0.50 -0.4
Or see this region's nucleotide sequence