Experiment: Manganese (II) chloride tetrahydrate 150 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06670 and SGL_RS06675 are separated by 68 nucleotides SGL_RS06675 and SGL_RS06680 are separated by 106 nucleotides
SGL_RS06670: SGL_RS06670 - TIGR01777 family oxidoreductase, at 1,025,519 to 1,026,442
_RS06670
SGL_RS06675: SGL_RS06675 - ABC transporter ATP-binding protein, at 1,026,511 to 1,027,737
_RS06675
SGL_RS06680: SGL_RS06680 - serine/threonine-protein kinase, at 1,027,844 to 1,029,331
_RS06680
Position (kb)
1026
1027
1028 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1025.590 kb on - strand at 1025.616 kb on + strand, within SGL_RS06670 at 1025.628 kb on - strand, within SGL_RS06670 at 1025.703 kb on + strand, within SGL_RS06670 at 1025.974 kb on + strand, within SGL_RS06670 at 1026.038 kb on + strand, within SGL_RS06670 at 1026.082 kb on + strand, within SGL_RS06670 at 1026.114 kb on + strand, within SGL_RS06670 at 1026.225 kb on - strand, within SGL_RS06670 at 1026.263 kb on + strand, within SGL_RS06670 at 1026.456 kb on - strand at 1026.597 kb on + strand at 1026.811 kb on - strand, within SGL_RS06675 at 1026.817 kb on + strand, within SGL_RS06675 at 1026.896 kb on + strand, within SGL_RS06675 at 1027.087 kb on - strand, within SGL_RS06675 at 1027.239 kb on + strand, within SGL_RS06675 at 1027.304 kb on - strand, within SGL_RS06675 at 1027.349 kb on + strand, within SGL_RS06675 at 1027.511 kb on + strand, within SGL_RS06675 at 1027.906 kb on + strand at 1027.923 kb on + strand at 1027.925 kb on + strand at 1027.994 kb on + strand, within SGL_RS06680 at 1028.021 kb on + strand, within SGL_RS06680 at 1028.220 kb on - strand, within SGL_RS06680 at 1028.489 kb on + strand, within SGL_RS06680 at 1028.574 kb on - strand, within SGL_RS06680 at 1028.590 kb on - strand, within SGL_RS06680 at 1028.730 kb on - strand, within SGL_RS06680
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 150 uM remove 1,025,590 - -0.2 1,025,616 + SGL_RS06670 0.10 +1.8 1,025,628 - SGL_RS06670 0.12 -0.9 1,025,703 + SGL_RS06670 0.20 +0.5 1,025,974 + SGL_RS06670 0.49 +0.7 1,026,038 + SGL_RS06670 0.56 +0.2 1,026,082 + SGL_RS06670 0.61 +0.2 1,026,114 + SGL_RS06670 0.64 -1.0 1,026,225 - SGL_RS06670 0.76 -0.3 1,026,263 + SGL_RS06670 0.81 -2.9 1,026,456 - -0.8 1,026,597 + -1.6 1,026,811 - SGL_RS06675 0.24 -2.0 1,026,817 + SGL_RS06675 0.25 -2.1 1,026,896 + SGL_RS06675 0.31 -3.9 1,027,087 - SGL_RS06675 0.47 -0.9 1,027,239 + SGL_RS06675 0.59 -1.0 1,027,304 - SGL_RS06675 0.65 -1.3 1,027,349 + SGL_RS06675 0.68 -2.0 1,027,511 + SGL_RS06675 0.81 -3.3 1,027,906 + -0.3 1,027,923 + +0.4 1,027,925 + -0.0 1,027,994 + SGL_RS06680 0.10 +0.0 1,028,021 + SGL_RS06680 0.12 -0.2 1,028,220 - SGL_RS06680 0.25 +0.4 1,028,489 + SGL_RS06680 0.43 +0.3 1,028,574 - SGL_RS06680 0.49 -0.3 1,028,590 - SGL_RS06680 0.50 -0.3 1,028,730 - SGL_RS06680 0.60 -0.1
Or see this region's nucleotide sequence