Experiment: Cobalt chloride 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS16850 and SGL_RS16855 are separated by 242 nucleotides SGL_RS16855 and SGL_RS16860 are separated by 65 nucleotides SGL_RS16860 and SGL_RS16865 are separated by 18 nucleotides SGL_RS16865 and SGL_RS16870 overlap by 4 nucleotides
SGL_RS16850: SGL_RS16850 - bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU, at 3,233,816 to 3,235,186
_RS16850
SGL_RS16855: SGL_RS16855 - DUF4327 family protein, at 3,235,429 to 3,235,680
_RS16855
SGL_RS16860: SGL_RS16860 - small ribosomal subunit biogenesis GTPase RsgA, at 3,235,746 to 3,236,855
_RS16860
SGL_RS16865: SGL_RS16865 - sulfurtransferase TusA family protein, at 3,236,874 to 3,237,128
_RS16865
SGL_RS16870: SGL_RS16870 - molecular chaperone DnaJ, at 3,237,125 to 3,238,258
_RS16870
Position (kb)
3235
3236
3237 Strain fitness (log2 ratio)
-2
-1
0
1 at 3235.295 kb on + strand at 3235.399 kb on + strand at 3235.409 kb on + strand at 3235.491 kb on + strand, within SGL_RS16855 at 3235.519 kb on + strand, within SGL_RS16855 at 3235.522 kb on - strand, within SGL_RS16855 at 3235.524 kb on - strand, within SGL_RS16855 at 3235.587 kb on + strand, within SGL_RS16855 at 3235.647 kb on + strand, within SGL_RS16855 at 3235.989 kb on + strand, within SGL_RS16860 at 3235.997 kb on + strand, within SGL_RS16860 at 3235.997 kb on + strand, within SGL_RS16860 at 3236.005 kb on - strand, within SGL_RS16860 at 3236.005 kb on - strand, within SGL_RS16860 at 3236.282 kb on + strand, within SGL_RS16860 at 3236.297 kb on + strand, within SGL_RS16860 at 3236.324 kb on - strand, within SGL_RS16860 at 3236.382 kb on + strand, within SGL_RS16860 at 3236.568 kb on - strand, within SGL_RS16860 at 3236.651 kb on + strand, within SGL_RS16860 at 3236.656 kb on + strand, within SGL_RS16860 at 3236.857 kb on + strand at 3236.857 kb on + strand at 3236.922 kb on + strand, within SGL_RS16865 at 3236.956 kb on - strand, within SGL_RS16865 at 3237.134 kb on + strand at 3237.330 kb on + strand, within SGL_RS16870
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 5 uM remove 3,235,295 + -0.0 3,235,399 + +0.1 3,235,409 + +0.2 3,235,491 + SGL_RS16855 0.25 +0.6 3,235,519 + SGL_RS16855 0.36 -0.3 3,235,522 - SGL_RS16855 0.37 +0.1 3,235,524 - SGL_RS16855 0.38 +0.3 3,235,587 + SGL_RS16855 0.63 +0.1 3,235,647 + SGL_RS16855 0.87 -0.3 3,235,989 + SGL_RS16860 0.22 -1.1 3,235,997 + SGL_RS16860 0.23 -1.8 3,235,997 + SGL_RS16860 0.23 -2.2 3,236,005 - SGL_RS16860 0.23 -2.5 3,236,005 - SGL_RS16860 0.23 -1.1 3,236,282 + SGL_RS16860 0.48 -1.3 3,236,297 + SGL_RS16860 0.50 -1.2 3,236,324 - SGL_RS16860 0.52 -2.3 3,236,382 + SGL_RS16860 0.57 -2.4 3,236,568 - SGL_RS16860 0.74 -1.2 3,236,651 + SGL_RS16860 0.82 -1.6 3,236,656 + SGL_RS16860 0.82 -1.2 3,236,857 + -0.2 3,236,857 + +0.1 3,236,922 + SGL_RS16865 0.19 -0.3 3,236,956 - SGL_RS16865 0.32 -0.1 3,237,134 + +1.0 3,237,330 + SGL_RS16870 0.18 -0.7
Or see this region's nucleotide sequence