Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS12590
Experiment: Cobalt chloride 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cobalt chloride 5 uM |
---|---|---|---|---|---|
remove | |||||
2,282,364 | + | SGL_RS12585 | 0.51 | -3.3 | |
2,282,397 | - | SGL_RS12585 | 0.53 | -2.0 | |
2,282,487 | + | SGL_RS12585 | 0.58 | +0.0 | |
2,282,601 | + | SGL_RS12585 | 0.65 | -2.6 | |
2,282,781 | - | SGL_RS12585 | 0.76 | -4.1 | |
2,282,932 | - | SGL_RS12585 | 0.85 | -3.2 | |
2,282,942 | - | SGL_RS12585 | 0.86 | -2.6 | |
2,283,606 | + | SGL_RS12590 | 0.79 | +2.0 | |
2,283,621 | + | SGL_RS12590 | 0.82 | +0.4 | |
2,283,629 | - | SGL_RS12590 | 0.84 | +0.2 | |
2,283,808 | + | +0.4 | |||
2,283,870 | + | +0.3 | |||
2,283,994 | - | SGL_RS12595 | 0.20 | +0.0 | |
2,284,018 | - | SGL_RS12595 | 0.23 | -0.1 | |
2,284,089 | + | SGL_RS12595 | 0.30 | -0.2 | |
2,284,281 | - | SGL_RS12595 | 0.49 | -0.2 | |
2,284,324 | + | SGL_RS12595 | 0.54 | +0.0 | |
2,284,422 | - | SGL_RS12595 | 0.64 | +0.2 | |
2,284,570 | - | SGL_RS12595 | 0.79 | -0.1 |
Or see this region's nucleotide sequence