Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS17240
Experiment: Cobalt chloride 3 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cobalt chloride 3 uM |
---|---|---|---|---|---|
remove | |||||
3,321,382 | + | SGL_RS17230 | 0.79 | +0.1 | |
3,321,590 | + | -0.3 | |||
3,321,678 | + | -0.1 | |||
3,321,685 | - | -0.1 | |||
3,321,860 | - | -0.1 | |||
3,322,099 | + | SGL_RS17235 | 0.58 | -0.3 | |
3,322,123 | + | SGL_RS17235 | 0.64 | +0.0 | |
3,322,400 | + | -0.8 | |||
3,322,494 | - | SGL_RS17240 | 0.43 | -0.0 | |
3,322,494 | - | SGL_RS17240 | 0.43 | -1.5 | |
3,322,503 | + | SGL_RS17240 | 0.46 | -1.1 | |
3,322,503 | + | SGL_RS17240 | 0.46 | -1.0 | |
3,322,512 | - | SGL_RS17240 | 0.49 | -1.2 | |
3,322,604 | - | SGL_RS17240 | 0.83 | -0.9 | |
3,322,612 | + | SGL_RS17240 | 0.86 | -2.0 |
Or see this region's nucleotide sequence