Experiment: Cobalt chloride 3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS01935 and SGL_RS01940 are separated by 261 nucleotides SGL_RS01940 and SGL_RS01945 overlap by 4 nucleotides
SGL_RS01935: SGL_RS01935 - iron ABC transporter permease, at 14,626 to 15,675
_RS01935
SGL_RS01940: SGL_RS01940 - ABC transporter ATP-binding protein, at 15,937 to 16,743
_RS01940
SGL_RS01945: SGL_RS01945 - iron-siderophore ABC transporter substrate-binding protein, at 16,740 to 17,687
_RS01945
Position (kb) 15
16
17 Strain fitness (log2 ratio) -1
0
1 at 15.058 kb on + strand, within SGL_RS01935 at 15.067 kb on - strand, within SGL_RS01935 at 15.156 kb on - strand, within SGL_RS01935 at 15.156 kb on - strand, within SGL_RS01935 at 15.273 kb on + strand, within SGL_RS01935 at 15.315 kb on - strand, within SGL_RS01935 at 15.327 kb on - strand, within SGL_RS01935 at 15.329 kb on + strand, within SGL_RS01935 at 15.329 kb on + strand, within SGL_RS01935 at 15.329 kb on + strand, within SGL_RS01935 at 15.337 kb on - strand, within SGL_RS01935 at 15.337 kb on - strand, within SGL_RS01935 at 15.337 kb on - strand, within SGL_RS01935 at 15.337 kb on - strand, within SGL_RS01935 at 15.337 kb on - strand, within SGL_RS01935 at 15.337 kb on - strand, within SGL_RS01935 at 15.420 kb on - strand, within SGL_RS01935 at 15.478 kb on - strand, within SGL_RS01935 at 15.553 kb on - strand, within SGL_RS01935 at 15.677 kb on + strand at 15.712 kb on + strand at 15.722 kb on + strand at 15.730 kb on - strand at 15.730 kb on - strand at 15.857 kb on - strand at 15.892 kb on - strand at 16.095 kb on - strand, within SGL_RS01940 at 16.125 kb on - strand, within SGL_RS01940 at 16.226 kb on + strand, within SGL_RS01940 at 16.226 kb on + strand, within SGL_RS01940 at 16.249 kb on + strand, within SGL_RS01940 at 16.363 kb on + strand, within SGL_RS01940 at 16.368 kb on - strand, within SGL_RS01940 at 16.370 kb on + strand, within SGL_RS01940 at 16.405 kb on + strand, within SGL_RS01940 at 16.411 kb on + strand, within SGL_RS01940 at 16.419 kb on - strand, within SGL_RS01940 at 16.450 kb on + strand, within SGL_RS01940 at 16.540 kb on - strand, within SGL_RS01940 at 16.574 kb on - strand, within SGL_RS01940 at 16.715 kb on + strand at 16.721 kb on - strand at 16.742 kb on - strand at 16.797 kb on - strand at 16.811 kb on + strand at 16.855 kb on + strand, within SGL_RS01945 at 16.932 kb on + strand, within SGL_RS01945 at 16.969 kb on - strand, within SGL_RS01945 at 16.979 kb on - strand, within SGL_RS01945 at 17.054 kb on + strand, within SGL_RS01945 at 17.222 kb on - strand, within SGL_RS01945 at 17.318 kb on + strand, within SGL_RS01945 at 17.421 kb on - strand, within SGL_RS01945 at 17.470 kb on + strand, within SGL_RS01945 at 17.488 kb on - strand, within SGL_RS01945 at 17.502 kb on - strand, within SGL_RS01945 at 17.586 kb on + strand, within SGL_RS01945 at 17.591 kb on + strand, within SGL_RS01945 at 17.599 kb on - strand at 17.613 kb on + strand at 17.710 kb on - strand at 17.723 kb on - strand at 17.723 kb on - strand at 17.736 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 3 uM remove 15,058 + SGL_RS01935 0.41 +0.1 15,067 - SGL_RS01935 0.42 +0.5 15,156 - SGL_RS01935 0.50 -0.1 15,156 - SGL_RS01935 0.50 +0.0 15,273 + SGL_RS01935 0.62 +0.0 15,315 - SGL_RS01935 0.66 -0.0 15,327 - SGL_RS01935 0.67 +0.3 15,329 + SGL_RS01935 0.67 +0.5 15,329 + SGL_RS01935 0.67 +0.0 15,329 + SGL_RS01935 0.67 +0.2 15,337 - SGL_RS01935 0.68 -0.1 15,337 - SGL_RS01935 0.68 -0.0 15,337 - SGL_RS01935 0.68 -0.4 15,337 - SGL_RS01935 0.68 +0.3 15,337 - SGL_RS01935 0.68 +0.2 15,337 - SGL_RS01935 0.68 -0.1 15,420 - SGL_RS01935 0.76 +0.1 15,478 - SGL_RS01935 0.81 +0.3 15,553 - SGL_RS01935 0.88 -0.3 15,677 + +0.1 15,712 + +0.2 15,722 + -0.1 15,730 - +0.2 15,730 - -0.3 15,857 - +0.1 15,892 - -0.2 16,095 - SGL_RS01940 0.20 -0.0 16,125 - SGL_RS01940 0.23 +0.4 16,226 + SGL_RS01940 0.36 -0.0 16,226 + SGL_RS01940 0.36 -0.6 16,249 + SGL_RS01940 0.39 +0.0 16,363 + SGL_RS01940 0.53 -0.2 16,368 - SGL_RS01940 0.53 -0.3 16,370 + SGL_RS01940 0.54 -0.1 16,405 + SGL_RS01940 0.58 -0.1 16,411 + SGL_RS01940 0.59 -0.1 16,419 - SGL_RS01940 0.60 -0.4 16,450 + SGL_RS01940 0.64 -0.1 16,540 - SGL_RS01940 0.75 -0.6 16,574 - SGL_RS01940 0.79 -0.6 16,715 + +0.0 16,721 - -0.1 16,742 - -0.3 16,797 - -0.1 16,811 + +0.5 16,855 + SGL_RS01945 0.12 -0.1 16,932 + SGL_RS01945 0.20 -0.5 16,969 - SGL_RS01945 0.24 -0.1 16,979 - SGL_RS01945 0.25 +0.9 17,054 + SGL_RS01945 0.33 +0.0 17,222 - SGL_RS01945 0.51 +0.2 17,318 + SGL_RS01945 0.61 -0.4 17,421 - SGL_RS01945 0.72 +0.4 17,470 + SGL_RS01945 0.77 -0.1 17,488 - SGL_RS01945 0.79 +0.1 17,502 - SGL_RS01945 0.80 +0.2 17,586 + SGL_RS01945 0.89 -0.1 17,591 + SGL_RS01945 0.90 +0.0 17,599 - -0.2 17,613 + +0.0 17,710 - +0.8 17,723 - +0.1 17,723 - -0.4 17,736 - -0.1
Or see this region's nucleotide sequence