Experiment: m-arsenite 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11035 and SGL_RS11040 are separated by 118 nucleotides SGL_RS11040 and SGL_RS11045 are separated by 202 nucleotides SGL_RS11045 and SGL_RS11050 are separated by 26 nucleotides SGL_RS11050 and SGL_RS11055 are separated by 83 nucleotides
SGL_RS11035: SGL_RS11035 - LapA family protein, at 1,937,474 to 1,938,310
_RS11035
SGL_RS11040: SGL_RS11040 - TMEM165/GDT1 family protein, at 1,938,429 to 1,938,782
_RS11040
SGL_RS11045: SGL_RS11045 - glutathione peroxidase, at 1,938,985 to 1,939,494
_RS11045
SGL_RS11050: SGL_RS11050 - DUF3493 domain-containing protein, at 1,939,521 to 1,939,781
_RS11050
SGL_RS11055: SGL_RS11055 - hypothetical protein, at 1,939,865 to 1,940,506
_RS11055
Position (kb) 1938
1939
1940 Strain fitness (log2 ratio) -1
0
1 at 1938.415 kb on + strand at 1938.572 kb on + strand, within SGL_RS11040 at 1938.595 kb on - strand, within SGL_RS11040 at 1938.647 kb on - strand, within SGL_RS11040 at 1938.659 kb on + strand, within SGL_RS11040 at 1939.124 kb on + strand, within SGL_RS11045 at 1939.174 kb on - strand, within SGL_RS11045 at 1939.558 kb on - strand, within SGL_RS11050 at 1939.558 kb on - strand, within SGL_RS11050 at 1939.931 kb on + strand, within SGL_RS11055 at 1940.041 kb on + strand, within SGL_RS11055 at 1940.080 kb on - strand, within SGL_RS11055 at 1940.116 kb on - strand, within SGL_RS11055 at 1940.246 kb on - strand, within SGL_RS11055 at 1940.343 kb on + strand, within SGL_RS11055
Per-strain Table
Position Strand Gene LocusTag Fraction m-arsenite 5 mM remove 1,938,415 + -0.1 1,938,572 + SGL_RS11040 0.40 +0.3 1,938,595 - SGL_RS11040 0.47 +0.1 1,938,647 - SGL_RS11040 0.62 +0.4 1,938,659 + SGL_RS11040 0.65 +0.2 1,939,124 + SGL_RS11045 0.27 +0.3 1,939,174 - SGL_RS11045 0.37 -0.6 1,939,558 - SGL_RS11050 0.14 -0.5 1,939,558 - SGL_RS11050 0.14 +1.1 1,939,931 + SGL_RS11055 0.10 -0.0 1,940,041 + SGL_RS11055 0.27 -0.0 1,940,080 - SGL_RS11055 0.33 +0.1 1,940,116 - SGL_RS11055 0.39 -0.1 1,940,246 - SGL_RS11055 0.59 +1.0 1,940,343 + SGL_RS11055 0.74 -0.2
Or see this region's nucleotide sequence