Experiment: m-arsenite 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06785 and SGL_RS06790 are separated by 52 nucleotides SGL_RS06790 and SGL_RS06795 are separated by 82 nucleotides SGL_RS06795 and SGL_RS06800 are separated by 80 nucleotides SGL_RS06800 and SGL_RS06805 are separated by 396 nucleotides SGL_RS06805 and SGL_RS06810 are separated by 142 nucleotides
SGL_RS06785: SGL_RS06785 - alpha/beta hydrolase, at 1,049,517 to 1,050,407
_RS06785
SGL_RS06790: SGL_RS06790 - hypothetical protein, at 1,050,460 to 1,050,729
_RS06790
SGL_RS06795: SGL_RS06795 - glutaredoxin 3, at 1,050,812 to 1,051,078
_RS06795
SGL_RS06800: SGL_RS06800 - glutathione synthase, at 1,051,159 to 1,052,121
_RS06800
SGL_RS06805: SGL_RS06805 - hypothetical protein, at 1,052,518 to 1,052,784
_RS06805
SGL_RS06810: SGL_RS06810 - 1,4-dihydroxy-2-naphthoyl-CoA synthase, at 1,052,927 to 1,053,754
_RS06810
Position (kb) 1051
1052
1053 Strain fitness (log2 ratio) -8
-7
-6
-5
-4
-3
-2
-1
0
1 at 1050.252 kb on + strand, within SGL_RS06785 at 1050.263 kb on + strand, within SGL_RS06785 at 1050.302 kb on + strand, within SGL_RS06785 at 1050.389 kb on + strand at 1050.390 kb on + strand at 1050.397 kb on - strand at 1050.397 kb on - strand at 1050.398 kb on - strand at 1050.409 kb on + strand at 1050.409 kb on - strand at 1050.645 kb on + strand, within SGL_RS06790 at 1050.733 kb on - strand at 1051.037 kb on - strand, within SGL_RS06795 at 1051.082 kb on + strand at 1051.146 kb on + strand at 1051.217 kb on - strand at 1051.310 kb on - strand, within SGL_RS06800 at 1051.374 kb on + strand, within SGL_RS06800 at 1051.389 kb on + strand, within SGL_RS06800 at 1051.389 kb on + strand, within SGL_RS06800 at 1051.408 kb on + strand, within SGL_RS06800 at 1051.437 kb on - strand, within SGL_RS06800 at 1051.542 kb on - strand, within SGL_RS06800 at 1051.641 kb on + strand, within SGL_RS06800 at 1051.737 kb on + strand, within SGL_RS06800 at 1052.064 kb on + strand at 1052.699 kb on - strand, within SGL_RS06805 at 1052.778 kb on + strand at 1052.778 kb on + strand at 1052.778 kb on + strand at 1052.786 kb on - strand at 1052.809 kb on + strand at 1052.925 kb on + strand at 1053.093 kb on - strand, within SGL_RS06810
Per-strain Table
Position Strand Gene LocusTag Fraction m-arsenite 5 mM remove 1,050,252 + SGL_RS06785 0.82 +0.3 1,050,263 + SGL_RS06785 0.84 +0.1 1,050,302 + SGL_RS06785 0.88 -0.1 1,050,389 + -1.6 1,050,390 + +0.0 1,050,397 - +0.3 1,050,397 - -0.1 1,050,398 - -0.1 1,050,409 + -0.1 1,050,409 - +0.1 1,050,645 + SGL_RS06790 0.69 +0.9 1,050,733 - -0.1 1,051,037 - SGL_RS06795 0.84 -0.9 1,051,082 + -0.8 1,051,146 + -0.8 1,051,217 - -2.3 1,051,310 - SGL_RS06800 0.16 -6.1 1,051,374 + SGL_RS06800 0.22 -4.9 1,051,389 + SGL_RS06800 0.24 -4.3 1,051,389 + SGL_RS06800 0.24 -4.4 1,051,408 + SGL_RS06800 0.26 -4.7 1,051,437 - SGL_RS06800 0.29 -8.3 1,051,542 - SGL_RS06800 0.40 -4.4 1,051,641 + SGL_RS06800 0.50 -6.9 1,051,737 + SGL_RS06800 0.60 -4.1 1,052,064 + -5.5 1,052,699 - SGL_RS06805 0.68 +0.2 1,052,778 + -0.1 1,052,778 + -0.4 1,052,778 + -0.4 1,052,786 - +0.2 1,052,809 + +0.0 1,052,925 + +0.0 1,053,093 - SGL_RS06810 0.20 -2.0
Or see this region's nucleotide sequence