Experiment: m-arsenite 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14055 and SGL_RS14060 overlap by 4 nucleotides SGL_RS14060 and SGL_RS14065 are separated by 10 nucleotides SGL_RS14065 and SGL_RS14070 are separated by 24 nucleotides SGL_RS14070 and SGL_RS14075 are separated by 102 nucleotides
SGL_RS14055: SGL_RS14055 - phosphoribosylglycinamide formyltransferase, at 2,613,717 to 2,614,370
_RS14055
SGL_RS14060: SGL_RS14060 - PD-(D/E)XK nuclease family protein, at 2,614,367 to 2,615,089
_RS14060
SGL_RS14065: SGL_RS14065 - AAA family ATPase, at 2,615,100 to 2,616,599
_RS14065
SGL_RS14070: SGL_RS14070 - class I SAM-dependent methyltransferase, at 2,616,624 to 2,617,382
_RS14070
SGL_RS14075: SGL_RS14075 - CAAD domain-containing protein, at 2,617,485 to 2,617,889
_RS14075
Position (kb)
2615
2616
2617 Strain fitness (log2 ratio)
-1
0
1 at 2614.124 kb on + strand, within SGL_RS14055 at 2614.169 kb on + strand, within SGL_RS14055 at 2614.169 kb on - strand, within SGL_RS14055 at 2614.177 kb on - strand, within SGL_RS14055 at 2614.206 kb on + strand, within SGL_RS14055 at 2614.206 kb on + strand, within SGL_RS14055 at 2614.216 kb on - strand, within SGL_RS14055 at 2614.250 kb on - strand, within SGL_RS14055 at 2614.371 kb on - strand at 2614.371 kb on - strand at 2614.378 kb on - strand at 2614.416 kb on + strand at 2614.449 kb on - strand, within SGL_RS14060 at 2614.536 kb on - strand, within SGL_RS14060 at 2614.572 kb on + strand, within SGL_RS14060 at 2614.605 kb on - strand, within SGL_RS14060 at 2614.678 kb on + strand, within SGL_RS14060 at 2614.678 kb on - strand, within SGL_RS14060 at 2614.821 kb on - strand, within SGL_RS14060 at 2615.017 kb on + strand at 2615.032 kb on - strand at 2615.146 kb on - strand at 2615.161 kb on - strand at 2615.205 kb on + strand at 2615.213 kb on - strand at 2615.229 kb on + strand at 2615.261 kb on - strand, within SGL_RS14065 at 2615.434 kb on - strand, within SGL_RS14065 at 2615.522 kb on + strand, within SGL_RS14065 at 2615.522 kb on + strand, within SGL_RS14065 at 2615.528 kb on - strand, within SGL_RS14065 at 2615.625 kb on + strand, within SGL_RS14065 at 2615.625 kb on + strand, within SGL_RS14065 at 2615.627 kb on - strand, within SGL_RS14065 at 2615.855 kb on + strand, within SGL_RS14065 at 2615.881 kb on + strand, within SGL_RS14065 at 2615.904 kb on - strand, within SGL_RS14065 at 2615.965 kb on + strand, within SGL_RS14065 at 2616.053 kb on - strand, within SGL_RS14065 at 2616.087 kb on + strand, within SGL_RS14065 at 2616.089 kb on - strand, within SGL_RS14065 at 2616.155 kb on - strand, within SGL_RS14065 at 2616.282 kb on + strand, within SGL_RS14065 at 2616.311 kb on + strand, within SGL_RS14065 at 2616.342 kb on + strand, within SGL_RS14065 at 2616.357 kb on - strand, within SGL_RS14065 at 2616.430 kb on + strand, within SGL_RS14065 at 2616.432 kb on - strand, within SGL_RS14065 at 2616.499 kb on - strand at 2616.500 kb on - strand at 2616.643 kb on - strand at 2616.796 kb on + strand, within SGL_RS14070 at 2616.960 kb on + strand, within SGL_RS14070 at 2617.125 kb on - strand, within SGL_RS14070 at 2617.184 kb on - strand, within SGL_RS14070 at 2617.213 kb on + strand, within SGL_RS14070 at 2617.307 kb on + strand at 2617.340 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-arsenite 2 mM remove 2,614,124 + SGL_RS14055 0.62 -0.3 2,614,169 + SGL_RS14055 0.69 +0.2 2,614,169 - SGL_RS14055 0.69 -0.5 2,614,177 - SGL_RS14055 0.70 -0.2 2,614,206 + SGL_RS14055 0.75 -0.0 2,614,206 + SGL_RS14055 0.75 -0.3 2,614,216 - SGL_RS14055 0.76 -0.4 2,614,250 - SGL_RS14055 0.81 -0.2 2,614,371 - -0.2 2,614,371 - -0.0 2,614,378 - -0.3 2,614,416 + -0.3 2,614,449 - SGL_RS14060 0.11 +0.0 2,614,536 - SGL_RS14060 0.23 -0.2 2,614,572 + SGL_RS14060 0.28 +0.1 2,614,605 - SGL_RS14060 0.33 -0.0 2,614,678 + SGL_RS14060 0.43 -0.0 2,614,678 - SGL_RS14060 0.43 -0.0 2,614,821 - SGL_RS14060 0.63 -0.4 2,615,017 + +0.0 2,615,032 - +0.2 2,615,146 - -0.2 2,615,161 - +0.1 2,615,205 + +0.2 2,615,213 - -0.7 2,615,229 + +0.2 2,615,261 - SGL_RS14065 0.11 -0.3 2,615,434 - SGL_RS14065 0.22 -0.7 2,615,522 + SGL_RS14065 0.28 -0.1 2,615,522 + SGL_RS14065 0.28 -0.2 2,615,528 - SGL_RS14065 0.29 -0.6 2,615,625 + SGL_RS14065 0.35 -0.5 2,615,625 + SGL_RS14065 0.35 +0.1 2,615,627 - SGL_RS14065 0.35 -0.9 2,615,855 + SGL_RS14065 0.50 -0.6 2,615,881 + SGL_RS14065 0.52 -1.2 2,615,904 - SGL_RS14065 0.54 -0.5 2,615,965 + SGL_RS14065 0.58 -0.4 2,616,053 - SGL_RS14065 0.64 +0.3 2,616,087 + SGL_RS14065 0.66 -0.4 2,616,089 - SGL_RS14065 0.66 -0.0 2,616,155 - SGL_RS14065 0.70 +0.1 2,616,282 + SGL_RS14065 0.79 -0.3 2,616,311 + SGL_RS14065 0.81 -0.6 2,616,342 + SGL_RS14065 0.83 -0.4 2,616,357 - SGL_RS14065 0.84 -0.3 2,616,430 + SGL_RS14065 0.89 -0.2 2,616,432 - SGL_RS14065 0.89 -0.5 2,616,499 - -1.6 2,616,500 - -0.2 2,616,643 - +0.1 2,616,796 + SGL_RS14070 0.23 -0.3 2,616,960 + SGL_RS14070 0.44 +0.2 2,617,125 - SGL_RS14070 0.66 -0.4 2,617,184 - SGL_RS14070 0.74 -0.0 2,617,213 + SGL_RS14070 0.78 +0.3 2,617,307 + -0.0 2,617,340 - +0.4
Or see this region's nucleotide sequence