Experiment: m-arsenite 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11810 and SGL_RS11815 are separated by 201 nucleotides SGL_RS11815 and SGL_RS11820 overlap by 4 nucleotides SGL_RS11820 and SGL_RS11825 are separated by 207 nucleotides
SGL_RS11810: SGL_RS11810 - urea ABC transporter substrate-binding protein, at 2,098,921 to 2,100,261
_RS11810
SGL_RS11815: SGL_RS11815 - DNA repair protein RadA, at 2,100,463 to 2,101,980
_RS11815
SGL_RS11820: SGL_RS11820 - pentapeptide repeat-containing protein, at 2,101,977 to 2,102,561
_RS11820
SGL_RS11825: SGL_RS11825 - sodium:proton antiporter, at 2,102,769 to 2,104,391
_RS11825
Position (kb)
2100
2101
2102 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2099.468 kb on - strand, within SGL_RS11810 at 2099.528 kb on + strand, within SGL_RS11810 at 2099.537 kb on - strand, within SGL_RS11810 at 2099.604 kb on - strand, within SGL_RS11810 at 2099.612 kb on + strand, within SGL_RS11810 at 2099.649 kb on + strand, within SGL_RS11810 at 2099.652 kb on - strand, within SGL_RS11810 at 2099.690 kb on + strand, within SGL_RS11810 at 2099.850 kb on - strand, within SGL_RS11810 at 2099.850 kb on - strand, within SGL_RS11810 at 2100.254 kb on - strand at 2100.383 kb on - strand at 2100.435 kb on + strand at 2100.450 kb on - strand at 2100.467 kb on - strand at 2100.530 kb on - strand at 2100.608 kb on + strand at 2100.616 kb on - strand, within SGL_RS11815 at 2100.662 kb on - strand, within SGL_RS11815 at 2100.754 kb on - strand, within SGL_RS11815 at 2100.908 kb on + strand, within SGL_RS11815 at 2100.908 kb on + strand, within SGL_RS11815 at 2100.960 kb on - strand, within SGL_RS11815 at 2101.377 kb on - strand, within SGL_RS11815 at 2101.477 kb on + strand, within SGL_RS11815 at 2101.579 kb on + strand, within SGL_RS11815 at 2101.658 kb on - strand, within SGL_RS11815 at 2101.703 kb on + strand, within SGL_RS11815 at 2101.900 kb on + strand at 2101.924 kb on + strand at 2101.937 kb on + strand at 2102.180 kb on - strand, within SGL_RS11820 at 2102.217 kb on + strand, within SGL_RS11820 at 2102.277 kb on + strand, within SGL_RS11820 at 2102.373 kb on + strand, within SGL_RS11820 at 2102.375 kb on - strand, within SGL_RS11820 at 2102.390 kb on + strand, within SGL_RS11820 at 2102.398 kb on - strand, within SGL_RS11820 at 2102.444 kb on + strand, within SGL_RS11820
Per-strain Table
Position Strand Gene LocusTag Fraction m-arsenite 2 mM remove 2,099,468 - SGL_RS11810 0.41 +0.4 2,099,528 + SGL_RS11810 0.45 +0.4 2,099,537 - SGL_RS11810 0.46 +0.3 2,099,604 - SGL_RS11810 0.51 -0.4 2,099,612 + SGL_RS11810 0.52 +0.3 2,099,649 + SGL_RS11810 0.54 +0.1 2,099,652 - SGL_RS11810 0.55 +0.2 2,099,690 + SGL_RS11810 0.57 -0.0 2,099,850 - SGL_RS11810 0.69 +0.4 2,099,850 - SGL_RS11810 0.69 +0.2 2,100,254 - +0.2 2,100,383 - -0.2 2,100,435 + +0.0 2,100,450 - +0.1 2,100,467 - -0.8 2,100,530 - -0.0 2,100,608 + +0.3 2,100,616 - SGL_RS11815 0.10 +0.1 2,100,662 - SGL_RS11815 0.13 +0.1 2,100,754 - SGL_RS11815 0.19 +0.3 2,100,908 + SGL_RS11815 0.29 +0.3 2,100,908 + SGL_RS11815 0.29 -0.4 2,100,960 - SGL_RS11815 0.33 +0.4 2,101,377 - SGL_RS11815 0.60 +0.2 2,101,477 + SGL_RS11815 0.67 -0.0 2,101,579 + SGL_RS11815 0.74 +0.5 2,101,658 - SGL_RS11815 0.79 -0.2 2,101,703 + SGL_RS11815 0.82 +1.3 2,101,900 + -0.6 2,101,924 + +0.5 2,101,937 + +0.1 2,102,180 - SGL_RS11820 0.35 -0.0 2,102,217 + SGL_RS11820 0.41 +0.2 2,102,277 + SGL_RS11820 0.51 -0.3 2,102,373 + SGL_RS11820 0.68 +0.4 2,102,375 - SGL_RS11820 0.68 +0.0 2,102,390 + SGL_RS11820 0.71 -0.0 2,102,398 - SGL_RS11820 0.72 -0.0 2,102,444 + SGL_RS11820 0.80 -3.1
Or see this region's nucleotide sequence