Experiment: m-arsenite 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS10825 and SGL_RS10830 are separated by 269 nucleotides SGL_RS10830 and SGL_RS10835 are separated by 56 nucleotides SGL_RS10835 and SGL_RS10840 are separated by 24 nucleotides SGL_RS10840 and SGL_RS10845 overlap by 8 nucleotides
SGL_RS10825: SGL_RS10825 - fatty acid desaturase, at 1,895,520 to 1,896,599
_RS10825
SGL_RS10830: SGL_RS10830 - pyridoxamine 5'-phosphate oxidase, at 1,896,869 to 1,897,513
_RS10830
SGL_RS10835: SGL_RS10835 - segregation/condensation protein A, at 1,897,570 to 1,898,412
_RS10835
SGL_RS10840: SGL_RS10840 - hypothetical protein, at 1,898,437 to 1,899,240
_RS10840
SGL_RS10845: SGL_RS10845 - YgiT-type zinc finger protein, at 1,899,233 to 1,899,481
_RS10845
Position (kb) 1897
1898
1899 Strain fitness (log2 ratio) -2
-1
0
1 at 1896.874 kb on + strand at 1896.880 kb on + strand at 1896.990 kb on + strand, within SGL_RS10830 at 1897.042 kb on + strand, within SGL_RS10830 at 1897.228 kb on - strand, within SGL_RS10830 at 1897.235 kb on + strand, within SGL_RS10830 at 1897.264 kb on - strand, within SGL_RS10830 at 1897.268 kb on + strand, within SGL_RS10830 at 1897.276 kb on - strand, within SGL_RS10830 at 1897.276 kb on - strand, within SGL_RS10830 at 1897.276 kb on - strand, within SGL_RS10830 at 1897.276 kb on - strand, within SGL_RS10830 at 1897.276 kb on - strand, within SGL_RS10830 at 1897.276 kb on - strand, within SGL_RS10830 at 1897.276 kb on - strand, within SGL_RS10830 at 1897.352 kb on - strand, within SGL_RS10830 at 1897.352 kb on - strand, within SGL_RS10830 at 1897.352 kb on - strand, within SGL_RS10830 at 1897.379 kb on - strand, within SGL_RS10830 at 1897.403 kb on - strand, within SGL_RS10830 at 1897.439 kb on - strand, within SGL_RS10830 at 1897.479 kb on - strand at 1897.683 kb on + strand, within SGL_RS10835 at 1897.747 kb on - strand, within SGL_RS10835 at 1898.407 kb on + strand at 1898.728 kb on + strand, within SGL_RS10840 at 1898.728 kb on + strand, within SGL_RS10840 at 1899.149 kb on - strand, within SGL_RS10840 at 1899.320 kb on + strand, within SGL_RS10845
Per-strain Table
Position Strand Gene LocusTag Fraction m-arsenite 2 mM remove 1,896,874 + -0.1 1,896,880 + +1.5 1,896,990 + SGL_RS10830 0.19 -0.1 1,897,042 + SGL_RS10830 0.27 +0.0 1,897,228 - SGL_RS10830 0.56 -0.0 1,897,235 + SGL_RS10830 0.57 -0.3 1,897,264 - SGL_RS10830 0.61 +0.1 1,897,268 + SGL_RS10830 0.62 +0.4 1,897,276 - SGL_RS10830 0.63 +0.5 1,897,276 - SGL_RS10830 0.63 +0.2 1,897,276 - SGL_RS10830 0.63 +0.3 1,897,276 - SGL_RS10830 0.63 +0.4 1,897,276 - SGL_RS10830 0.63 +0.2 1,897,276 - SGL_RS10830 0.63 +0.7 1,897,276 - SGL_RS10830 0.63 +0.5 1,897,352 - SGL_RS10830 0.75 +0.3 1,897,352 - SGL_RS10830 0.75 +0.4 1,897,352 - SGL_RS10830 0.75 +0.3 1,897,379 - SGL_RS10830 0.79 -0.2 1,897,403 - SGL_RS10830 0.83 +0.7 1,897,439 - SGL_RS10830 0.88 +0.3 1,897,479 - +0.4 1,897,683 + SGL_RS10835 0.13 -1.1 1,897,747 - SGL_RS10835 0.21 -1.9 1,898,407 + -0.0 1,898,728 + SGL_RS10840 0.36 +1.0 1,898,728 + SGL_RS10840 0.36 -0.3 1,899,149 - SGL_RS10840 0.89 -0.1 1,899,320 + SGL_RS10845 0.35 -0.1
Or see this region's nucleotide sequence