Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS20030
Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 5 uM |
---|---|---|---|---|---|
remove | |||||
1,864,142 | - | -0.1 | |||
1,864,275 | + | -1.2 | |||
1,864,341 | - | SGL_RS20030 | 0.13 | +1.3 | |
1,864,406 | + | SGL_RS20030 | 0.22 | +0.9 | |
1,864,414 | - | SGL_RS20030 | 0.23 | +0.8 | |
1,864,614 | - | SGL_RS20030 | 0.49 | +1.6 | |
1,864,657 | - | SGL_RS20030 | 0.55 | +0.6 | |
1,864,987 | - | +1.3 | |||
1,865,053 | - | +0.3 | |||
1,865,118 | + | SGL_RS10680 | 0.19 | -0.7 | |
1,865,409 | - | SGL_RS10680 | 0.85 | -0.2 | |
1,865,425 | + | SGL_RS10680 | 0.89 | -0.7 | |
1,865,425 | + | SGL_RS10680 | 0.89 | +0.3 | |
1,865,433 | - | +0.3 | |||
1,865,521 | + | +0.8 | |||
1,865,907 | + | SGL_RS10685 | 0.23 | +0.8 | |
1,865,955 | + | SGL_RS10685 | 0.27 | -1.3 |
Or see this region's nucleotide sequence