Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS19730
Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 5 uM |
---|---|---|---|---|---|
remove | |||||
30,395 | + | SGL_RS01515 | 0.72 | +0.2 | |
30,402 | - | SGL_RS01515 | 0.73 | +0.5 | |
30,431 | - | SGL_RS01515 | 0.73 | +0.7 | |
30,460 | - | SGL_RS01515 | 0.74 | +0.0 | |
30,460 | - | SGL_RS01515 | 0.74 | +0.7 | |
30,511 | - | SGL_RS01515 | 0.76 | +0.5 | |
30,616 | + | SGL_RS01515 | 0.79 | -0.3 | |
30,654 | + | SGL_RS01515 | 0.80 | +0.0 | |
30,676 | + | SGL_RS01515 | 0.81 | +0.4 | |
30,766 | - | SGL_RS01515 | 0.83 | +0.9 | |
30,804 | + | SGL_RS01515 | 0.85 | -0.5 | |
30,804 | + | SGL_RS01515 | 0.85 | +0.2 | |
30,812 | - | SGL_RS01515 | 0.85 | +0.3 | |
30,817 | - | SGL_RS01515 | 0.85 | -0.1 | |
30,833 | - | SGL_RS01515 | 0.85 | +0.4 | |
30,855 | + | SGL_RS01515 | 0.86 | +0.0 | |
30,978 | + | SGL_RS01515 | 0.90 | -0.1 | |
30,991 | - | +0.4 | |||
31,016 | + | +0.2 | |||
31,029 | - | +0.6 | |||
31,111 | + | +0.8 | |||
31,172 | + | +1.0 | |||
31,347 | + | -0.3 | |||
31,347 | + | +1.3 | |||
31,381 | - | SGL_RS19730 | 0.25 | +1.4 | |
31,387 | - | SGL_RS19730 | 0.31 | +1.0 | |
31,389 | - | SGL_RS19730 | 0.32 | +0.4 | |
31,511 | - | SGL_RS19320 | 0.26 | -0.3 | |
31,545 | + | SGL_RS19320 | 0.35 | +0.2 | |
31,587 | - | SGL_RS19320 | 0.45 | +0.4 | |
31,587 | - | SGL_RS19320 | 0.45 | +0.0 | |
31,722 | - | SGL_RS19320 | 0.80 | -0.5 | |
32,079 | - | -0.7 | |||
32,089 | + | +0.1 |
Or see this region's nucleotide sequence