Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS18320 and SGL_RS18325 are separated by 110 nucleotides SGL_RS18325 and SGL_RS18330 are separated by 143 nucleotides SGL_RS18330 and SGL_RS18335 are separated by 45 nucleotides SGL_RS18335 and SGL_RS18340 are separated by 17 nucleotides
SGL_RS18320: SGL_RS18320 - serine/threonine-protein kinase, at 3,557,481 to 3,559,088
_RS18320
SGL_RS18325: SGL_RS18325 - NAD(P)/FAD-dependent oxidoreductase, at 3,559,199 to 3,560,179
_RS18325
SGL_RS18330: SGL_RS18330 - hypothetical protein, at 3,560,323 to 3,560,709
_RS18330
SGL_RS18335: SGL_RS18335 - hypothetical protein, at 3,560,755 to 3,561,144
_RS18335
SGL_RS18340: SGL_RS18340 - hypothetical protein, at 3,561,162 to 3,561,665
_RS18340
Position (kb)
3559
3560
3561 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3558.209 kb on - strand, within SGL_RS18320 at 3558.209 kb on - strand, within SGL_RS18320 at 3558.211 kb on + strand, within SGL_RS18320 at 3558.219 kb on - strand, within SGL_RS18320 at 3558.228 kb on + strand, within SGL_RS18320 at 3558.288 kb on + strand, within SGL_RS18320 at 3558.288 kb on + strand, within SGL_RS18320 at 3558.288 kb on + strand, within SGL_RS18320 at 3558.328 kb on - strand, within SGL_RS18320 at 3558.401 kb on - strand, within SGL_RS18320 at 3558.427 kb on - strand, within SGL_RS18320 at 3558.449 kb on + strand, within SGL_RS18320 at 3558.516 kb on + strand, within SGL_RS18320 at 3558.585 kb on - strand, within SGL_RS18320 at 3558.657 kb on - strand, within SGL_RS18320 at 3558.714 kb on - strand, within SGL_RS18320 at 3558.730 kb on + strand, within SGL_RS18320 at 3558.731 kb on + strand, within SGL_RS18320 at 3558.867 kb on - strand, within SGL_RS18320 at 3558.889 kb on + strand, within SGL_RS18320 at 3558.975 kb on - strand at 3559.020 kb on + strand at 3559.137 kb on + strand at 3559.392 kb on + strand, within SGL_RS18325 at 3559.416 kb on - strand, within SGL_RS18325 at 3559.628 kb on + strand, within SGL_RS18325 at 3559.636 kb on + strand, within SGL_RS18325 at 3559.654 kb on - strand, within SGL_RS18325 at 3559.723 kb on + strand, within SGL_RS18325 at 3559.769 kb on + strand, within SGL_RS18325 at 3559.791 kb on - strand, within SGL_RS18325 at 3559.845 kb on + strand, within SGL_RS18325 at 3559.913 kb on + strand, within SGL_RS18325 at 3559.986 kb on - strand, within SGL_RS18325 at 3560.099 kb on - strand at 3560.259 kb on - strand at 3560.275 kb on + strand at 3560.465 kb on + strand, within SGL_RS18330 at 3560.500 kb on + strand, within SGL_RS18330 at 3560.542 kb on - strand, within SGL_RS18330 at 3560.623 kb on + strand, within SGL_RS18330 at 3560.623 kb on + strand, within SGL_RS18330 at 3560.631 kb on - strand, within SGL_RS18330 at 3560.667 kb on + strand, within SGL_RS18330 at 3560.744 kb on + strand at 3560.800 kb on - strand, within SGL_RS18335 at 3560.957 kb on + strand, within SGL_RS18335
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 3,558,209 - SGL_RS18320 0.45 -1.9 3,558,209 - SGL_RS18320 0.45 -2.9 3,558,211 + SGL_RS18320 0.45 -4.3 3,558,219 - SGL_RS18320 0.46 -3.8 3,558,228 + SGL_RS18320 0.46 -3.0 3,558,288 + SGL_RS18320 0.50 -3.9 3,558,288 + SGL_RS18320 0.50 -2.0 3,558,288 + SGL_RS18320 0.50 -4.3 3,558,328 - SGL_RS18320 0.53 -2.1 3,558,401 - SGL_RS18320 0.57 -2.3 3,558,427 - SGL_RS18320 0.59 -4.0 3,558,449 + SGL_RS18320 0.60 -2.0 3,558,516 + SGL_RS18320 0.64 -3.5 3,558,585 - SGL_RS18320 0.69 -3.0 3,558,657 - SGL_RS18320 0.73 -1.7 3,558,714 - SGL_RS18320 0.77 -2.4 3,558,730 + SGL_RS18320 0.78 -3.0 3,558,731 + SGL_RS18320 0.78 -5.6 3,558,867 - SGL_RS18320 0.86 -4.0 3,558,889 + SGL_RS18320 0.88 -4.3 3,558,975 - -3.2 3,559,020 + -0.6 3,559,137 + -0.3 3,559,392 + SGL_RS18325 0.20 -1.5 3,559,416 - SGL_RS18325 0.22 -1.9 3,559,628 + SGL_RS18325 0.44 -2.1 3,559,636 + SGL_RS18325 0.45 -1.9 3,559,654 - SGL_RS18325 0.46 -1.7 3,559,723 + SGL_RS18325 0.53 -1.4 3,559,769 + SGL_RS18325 0.58 -2.5 3,559,791 - SGL_RS18325 0.60 -3.4 3,559,845 + SGL_RS18325 0.66 -2.6 3,559,913 + SGL_RS18325 0.73 -1.7 3,559,986 - SGL_RS18325 0.80 -4.0 3,560,099 - -3.1 3,560,259 - +1.0 3,560,275 + -0.4 3,560,465 + SGL_RS18330 0.37 +0.8 3,560,500 + SGL_RS18330 0.46 +0.6 3,560,542 - SGL_RS18330 0.57 +0.1 3,560,623 + SGL_RS18330 0.78 +0.3 3,560,623 + SGL_RS18330 0.78 +0.2 3,560,631 - SGL_RS18330 0.80 +0.1 3,560,667 + SGL_RS18330 0.89 +0.0 3,560,744 + -0.1 3,560,800 - SGL_RS18335 0.12 -0.3 3,560,957 + SGL_RS18335 0.52 +0.1
Or see this region's nucleotide sequence