Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS18095 and SGL_RS18100 are separated by 121 nucleotides SGL_RS18100 and SGL_RS18105 are separated by 118 nucleotides SGL_RS18105 and SGL_RS18110 are separated by 35 nucleotides
SGL_RS18095: SGL_RS18095 - TIGR03943 family protein, at 3,517,887 to 3,518,735
_RS18095
SGL_RS18100: SGL_RS18100 - SH3 domain-containing protein, at 3,518,857 to 3,519,312
_RS18100
SGL_RS18105: SGL_RS18105 - anhydro-N-acetylmuramic acid kinase, at 3,519,431 to 3,520,561
_RS18105
SGL_RS18110: SGL_RS18110 - peptide chain release factor 1, at 3,520,597 to 3,521,694
_RS18110
Position (kb)
3519
3520
3521 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 3518.519 kb on + strand, within SGL_RS18095 at 3518.527 kb on - strand, within SGL_RS18095 at 3518.599 kb on + strand, within SGL_RS18095 at 3518.616 kb on + strand, within SGL_RS18095 at 3518.624 kb on - strand, within SGL_RS18095 at 3518.722 kb on - strand at 3519.056 kb on - strand, within SGL_RS18100 at 3519.236 kb on + strand, within SGL_RS18100 at 3519.467 kb on - strand at 3519.481 kb on - strand at 3519.508 kb on + strand at 3519.516 kb on - strand at 3519.573 kb on + strand, within SGL_RS18105 at 3519.689 kb on + strand, within SGL_RS18105 at 3519.697 kb on - strand, within SGL_RS18105 at 3519.711 kb on - strand, within SGL_RS18105 at 3519.720 kb on + strand, within SGL_RS18105 at 3519.745 kb on + strand, within SGL_RS18105 at 3519.791 kb on - strand, within SGL_RS18105 at 3519.794 kb on - strand, within SGL_RS18105 at 3519.801 kb on - strand, within SGL_RS18105 at 3520.063 kb on - strand, within SGL_RS18105 at 3520.075 kb on + strand, within SGL_RS18105 at 3520.075 kb on + strand, within SGL_RS18105 at 3520.075 kb on + strand, within SGL_RS18105 at 3520.086 kb on + strand, within SGL_RS18105 at 3520.206 kb on + strand, within SGL_RS18105 at 3520.220 kb on - strand, within SGL_RS18105 at 3520.260 kb on + strand, within SGL_RS18105 at 3520.316 kb on - strand, within SGL_RS18105 at 3520.326 kb on - strand, within SGL_RS18105 at 3520.338 kb on + strand, within SGL_RS18105 at 3520.339 kb on + strand, within SGL_RS18105 at 3520.498 kb on + strand at 3520.541 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 3,518,519 + SGL_RS18095 0.74 -5.2 3,518,527 - SGL_RS18095 0.75 -3.9 3,518,599 + SGL_RS18095 0.84 -3.8 3,518,616 + SGL_RS18095 0.86 -2.5 3,518,624 - SGL_RS18095 0.87 -2.7 3,518,722 - -0.1 3,519,056 - SGL_RS18100 0.44 -4.9 3,519,236 + SGL_RS18100 0.83 -5.0 3,519,467 - +1.3 3,519,481 - +1.5 3,519,508 + +2.3 3,519,516 - +1.2 3,519,573 + SGL_RS18105 0.13 +1.4 3,519,689 + SGL_RS18105 0.23 +1.3 3,519,697 - SGL_RS18105 0.24 +1.5 3,519,711 - SGL_RS18105 0.25 +1.4 3,519,720 + SGL_RS18105 0.26 +1.6 3,519,745 + SGL_RS18105 0.28 +1.6 3,519,791 - SGL_RS18105 0.32 +1.7 3,519,794 - SGL_RS18105 0.32 +1.7 3,519,801 - SGL_RS18105 0.33 +1.7 3,520,063 - SGL_RS18105 0.56 +1.6 3,520,075 + SGL_RS18105 0.57 +2.0 3,520,075 + SGL_RS18105 0.57 +1.5 3,520,075 + SGL_RS18105 0.57 +0.7 3,520,086 + SGL_RS18105 0.58 +1.7 3,520,206 + SGL_RS18105 0.69 +1.3 3,520,220 - SGL_RS18105 0.70 +1.2 3,520,260 + SGL_RS18105 0.73 +1.3 3,520,316 - SGL_RS18105 0.78 +1.8 3,520,326 - SGL_RS18105 0.79 +1.8 3,520,338 + SGL_RS18105 0.80 +1.6 3,520,339 + SGL_RS18105 0.80 +1.6 3,520,498 + +1.9 3,520,541 - -0.4
Or see this region's nucleotide sequence