Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS18085
Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 5 uM |
---|---|---|---|---|---|
remove | |||||
3,514,047 | + | -0.5 | |||
3,514,095 | + | +0.0 | |||
3,514,159 | - | -1.1 | |||
3,514,164 | - | -0.2 | |||
3,514,192 | - | +0.2 | |||
3,514,281 | - | +1.0 | |||
3,514,445 | + | SGL_RS18085 | 0.11 | +1.2 | |
3,514,527 | + | SGL_RS18085 | 0.15 | +0.3 | |
3,514,538 | + | SGL_RS18085 | 0.15 | +1.1 | |
3,514,673 | + | SGL_RS18085 | 0.22 | +1.4 | |
3,514,840 | + | SGL_RS18085 | 0.31 | +1.0 | |
3,515,238 | + | SGL_RS18085 | 0.51 | +0.8 | |
3,515,246 | - | SGL_RS18085 | 0.51 | +1.0 | |
3,515,548 | - | SGL_RS18085 | 0.67 | +1.6 | |
3,515,653 | - | SGL_RS18085 | 0.72 | +1.0 | |
3,515,688 | + | SGL_RS18085 | 0.74 | -0.3 | |
3,515,693 | + | SGL_RS18085 | 0.74 | +1.1 | |
3,515,694 | - | SGL_RS18085 | 0.74 | +1.6 | |
3,515,694 | - | SGL_RS18085 | 0.74 | +0.9 | |
3,515,734 | + | SGL_RS18085 | 0.76 | +1.4 | |
3,515,768 | - | SGL_RS18085 | 0.78 | +0.7 | |
3,515,785 | + | SGL_RS18085 | 0.79 | +1.2 | |
3,515,837 | + | SGL_RS18085 | 0.81 | +1.5 | |
3,516,292 | - | +0.2 | |||
3,516,434 | + | -0.5 | |||
3,516,555 | + | -2.4 | |||
3,516,590 | + | -2.1 | |||
3,516,781 | - | SGL_RS18090 | 0.16 | -0.9 |
Or see this region's nucleotide sequence