Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS17750 and SGL_RS17755 are separated by 126 nucleotides SGL_RS17755 and SGL_RS17760 are separated by 170 nucleotides SGL_RS17760 and SGL_RS17765 are separated by 93 nucleotides
SGL_RS17750: SGL_RS17750 - circadian clock protein KaiA, at 3,433,362 to 3,434,261
_RS17750
SGL_RS17755: SGL_RS17755 - circadian clock protein KaiB, at 3,434,388 to 3,434,705
_RS17755
SGL_RS17760: SGL_RS17760 - circadian clock protein KaiC, at 3,434,876 to 3,436,435
_RS17760
SGL_RS17765: SGL_RS17765 - DUF4114 domain-containing protein, at 3,436,529 to 3,441,844
_RS17765
Position (kb)
3434
3435
3436
3437 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 3434.447 kb on - strand, within SGL_RS17755 at 3434.525 kb on - strand, within SGL_RS17755 at 3434.661 kb on - strand, within SGL_RS17755 at 3434.997 kb on + strand at 3435.002 kb on + strand at 3435.010 kb on - strand at 3435.270 kb on + strand, within SGL_RS17760 at 3435.306 kb on + strand, within SGL_RS17760 at 3435.387 kb on + strand, within SGL_RS17760 at 3435.395 kb on - strand, within SGL_RS17760 at 3435.397 kb on + strand, within SGL_RS17760 at 3435.558 kb on + strand, within SGL_RS17760 at 3435.641 kb on + strand, within SGL_RS17760 at 3435.641 kb on + strand, within SGL_RS17760 at 3435.641 kb on + strand, within SGL_RS17760 at 3435.649 kb on - strand, within SGL_RS17760 at 3435.649 kb on - strand, within SGL_RS17760 at 3435.755 kb on + strand, within SGL_RS17760 at 3436.027 kb on + strand, within SGL_RS17760 at 3436.029 kb on + strand, within SGL_RS17760 at 3436.290 kb on + strand at 3436.420 kb on - strand at 3436.420 kb on - strand at 3436.504 kb on - strand at 3436.600 kb on + strand at 3436.606 kb on - strand at 3436.615 kb on + strand at 3436.621 kb on + strand at 3436.629 kb on - strand at 3436.658 kb on + strand at 3436.688 kb on - strand at 3436.699 kb on - strand at 3436.773 kb on + strand at 3436.773 kb on + strand at 3436.781 kb on - strand at 3436.827 kb on - strand at 3436.853 kb on + strand at 3437.144 kb on - strand, within SGL_RS17765 at 3437.162 kb on - strand, within SGL_RS17765 at 3437.212 kb on + strand, within SGL_RS17765 at 3437.212 kb on + strand, within SGL_RS17765 at 3437.346 kb on + strand, within SGL_RS17765
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 3,434,447 - SGL_RS17755 0.19 -0.7 3,434,525 - SGL_RS17755 0.43 -0.3 3,434,661 - SGL_RS17755 0.86 +1.0 3,434,997 + +4.2 3,435,002 + +3.5 3,435,010 - +3.5 3,435,270 + SGL_RS17760 0.25 +3.2 3,435,306 + SGL_RS17760 0.28 +3.7 3,435,387 + SGL_RS17760 0.33 +3.2 3,435,395 - SGL_RS17760 0.33 +3.2 3,435,397 + SGL_RS17760 0.33 +3.3 3,435,558 + SGL_RS17760 0.44 +3.1 3,435,641 + SGL_RS17760 0.49 +3.4 3,435,641 + SGL_RS17760 0.49 +2.4 3,435,641 + SGL_RS17760 0.49 +2.0 3,435,649 - SGL_RS17760 0.50 +3.6 3,435,649 - SGL_RS17760 0.50 +3.0 3,435,755 + SGL_RS17760 0.56 +3.4 3,436,027 + SGL_RS17760 0.74 +3.5 3,436,029 + SGL_RS17760 0.74 +1.9 3,436,290 + +2.8 3,436,420 - +3.5 3,436,420 - +3.1 3,436,504 - -0.7 3,436,600 + -0.0 3,436,606 - +0.7 3,436,615 + +1.2 3,436,621 + -0.8 3,436,629 - +0.6 3,436,658 + -0.6 3,436,688 - -0.3 3,436,699 - +0.4 3,436,773 + +0.1 3,436,773 + +0.4 3,436,781 - -0.2 3,436,827 - -0.4 3,436,853 + -0.2 3,437,144 - SGL_RS17765 0.12 -0.2 3,437,162 - SGL_RS17765 0.12 -0.5 3,437,212 + SGL_RS17765 0.13 -0.8 3,437,212 + SGL_RS17765 0.13 -0.2 3,437,346 + SGL_RS17765 0.15 +0.0
Or see this region's nucleotide sequence