Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS16680 and SGL_RS16685 are separated by 101 nucleotides SGL_RS16685 and SGL_RS16690 are separated by 235 nucleotides SGL_RS16690 and SGL_RS16695 are separated by 9 nucleotides
SGL_RS16680: SGL_RS16680 - DUF4922 domain-containing protein, at 3,199,930 to 3,200,838
_RS16680
SGL_RS16685: SGL_RS16685 - hypothetical protein, at 3,200,940 to 3,201,452
_RS16685
SGL_RS16690: SGL_RS16690 - adenosine kinase, at 3,201,688 to 3,202,689
_RS16690
SGL_RS16695: SGL_RS16695 - magnesium/cobalt transporter CorA, at 3,202,699 to 3,203,862
_RS16695
Position (kb)
3201
3202
3203 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3200.780 kb on + strand at 3200.780 kb on + strand at 3200.836 kb on - strand at 3201.009 kb on - strand, within SGL_RS16685 at 3201.020 kb on - strand, within SGL_RS16685 at 3201.066 kb on - strand, within SGL_RS16685 at 3201.241 kb on + strand, within SGL_RS16685 at 3201.311 kb on + strand, within SGL_RS16685 at 3201.689 kb on - strand at 3201.752 kb on + strand at 3201.849 kb on - strand, within SGL_RS16690 at 3201.849 kb on - strand, within SGL_RS16690 at 3201.886 kb on + strand, within SGL_RS16690 at 3201.914 kb on - strand, within SGL_RS16690 at 3202.436 kb on - strand, within SGL_RS16690 at 3202.495 kb on + strand, within SGL_RS16690 at 3202.553 kb on + strand, within SGL_RS16690 at 3202.561 kb on - strand, within SGL_RS16690 at 3202.633 kb on - strand at 3202.840 kb on + strand, within SGL_RS16695 at 3203.402 kb on + strand, within SGL_RS16695 at 3203.409 kb on + strand, within SGL_RS16695 at 3203.584 kb on + strand, within SGL_RS16695 at 3203.592 kb on - strand, within SGL_RS16695
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 3,200,780 + -0.0 3,200,780 + -0.3 3,200,836 - +0.0 3,201,009 - SGL_RS16685 0.13 -0.1 3,201,020 - SGL_RS16685 0.16 -0.2 3,201,066 - SGL_RS16685 0.25 -0.3 3,201,241 + SGL_RS16685 0.59 +1.0 3,201,311 + SGL_RS16685 0.72 -0.2 3,201,689 - -1.8 3,201,752 + -1.9 3,201,849 - SGL_RS16690 0.16 +0.1 3,201,849 - SGL_RS16690 0.16 -3.5 3,201,886 + SGL_RS16690 0.20 -3.5 3,201,914 - SGL_RS16690 0.23 -2.5 3,202,436 - SGL_RS16690 0.75 +0.1 3,202,495 + SGL_RS16690 0.81 +0.7 3,202,553 + SGL_RS16690 0.86 -0.7 3,202,561 - SGL_RS16690 0.87 -2.9 3,202,633 - -3.6 3,202,840 + SGL_RS16695 0.12 -0.2 3,203,402 + SGL_RS16695 0.60 +0.3 3,203,409 + SGL_RS16695 0.61 +0.4 3,203,584 + SGL_RS16695 0.76 -0.2 3,203,592 - SGL_RS16695 0.77 +0.4
Or see this region's nucleotide sequence