Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS16320 and SGL_RS16325 are separated by 165 nucleotides SGL_RS16325 and SGL_RS16330 are separated by 128 nucleotides
SGL_RS16320: SGL_RS16320 - hypothetical protein, at 3,110,910 to 3,111,830
_RS16320
SGL_RS16325: SGL_RS16325 - RidA family protein, at 3,111,996 to 3,112,388
_RS16325
SGL_RS16330: SGL_RS16330 - NADP-specific glutamate dehydrogenase, at 3,112,517 to 3,113,803
_RS16330
Position (kb)
3111
3112
3113 Strain fitness (log2 ratio)
-1
0
1
2 at 3111.321 kb on - strand, within SGL_RS16320 at 3112.028 kb on - strand at 3112.045 kb on + strand, within SGL_RS16325 at 3112.128 kb on + strand, within SGL_RS16325 at 3112.184 kb on + strand, within SGL_RS16325 at 3112.192 kb on - strand, within SGL_RS16325 at 3112.318 kb on - strand, within SGL_RS16325 at 3112.326 kb on - strand, within SGL_RS16325 at 3112.376 kb on + strand at 3112.382 kb on - strand at 3112.395 kb on + strand at 3112.482 kb on - strand at 3112.697 kb on + strand, within SGL_RS16330 at 3112.701 kb on + strand, within SGL_RS16330 at 3112.715 kb on + strand, within SGL_RS16330 at 3112.723 kb on - strand, within SGL_RS16330 at 3112.723 kb on - strand, within SGL_RS16330 at 3112.760 kb on + strand, within SGL_RS16330 at 3112.768 kb on - strand, within SGL_RS16330 at 3112.786 kb on + strand, within SGL_RS16330 at 3112.794 kb on - strand, within SGL_RS16330 at 3112.853 kb on + strand, within SGL_RS16330 at 3112.888 kb on + strand, within SGL_RS16330 at 3112.949 kb on - strand, within SGL_RS16330 at 3112.956 kb on + strand, within SGL_RS16330 at 3112.985 kb on + strand, within SGL_RS16330 at 3113.021 kb on + strand, within SGL_RS16330 at 3113.077 kb on + strand, within SGL_RS16330 at 3113.102 kb on + strand, within SGL_RS16330 at 3113.124 kb on - strand, within SGL_RS16330 at 3113.156 kb on + strand, within SGL_RS16330 at 3113.318 kb on + strand, within SGL_RS16330 at 3113.318 kb on + strand, within SGL_RS16330
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 3,111,321 - SGL_RS16320 0.45 +0.1 3,112,028 - +1.1 3,112,045 + SGL_RS16325 0.12 +0.3 3,112,128 + SGL_RS16325 0.34 +2.1 3,112,184 + SGL_RS16325 0.48 +1.5 3,112,192 - SGL_RS16325 0.50 +0.6 3,112,318 - SGL_RS16325 0.82 +0.6 3,112,326 - SGL_RS16325 0.84 +1.3 3,112,376 + -0.5 3,112,382 - +0.9 3,112,395 + -0.9 3,112,482 - +0.9 3,112,697 + SGL_RS16330 0.14 +0.3 3,112,701 + SGL_RS16330 0.14 -0.2 3,112,715 + SGL_RS16330 0.15 -0.2 3,112,723 - SGL_RS16330 0.16 -0.2 3,112,723 - SGL_RS16330 0.16 +0.4 3,112,760 + SGL_RS16330 0.19 -0.2 3,112,768 - SGL_RS16330 0.20 -1.0 3,112,786 + SGL_RS16330 0.21 -0.7 3,112,794 - SGL_RS16330 0.22 +0.9 3,112,853 + SGL_RS16330 0.26 +0.3 3,112,888 + SGL_RS16330 0.29 -1.3 3,112,949 - SGL_RS16330 0.34 +0.6 3,112,956 + SGL_RS16330 0.34 -1.0 3,112,985 + SGL_RS16330 0.36 +0.3 3,113,021 + SGL_RS16330 0.39 +0.7 3,113,077 + SGL_RS16330 0.44 -0.2 3,113,102 + SGL_RS16330 0.45 +0.1 3,113,124 - SGL_RS16330 0.47 -0.2 3,113,156 + SGL_RS16330 0.50 +0.3 3,113,318 + SGL_RS16330 0.62 -0.6 3,113,318 + SGL_RS16330 0.62 +0.0
Or see this region's nucleotide sequence