Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS15750

Experiment: Nickel (II) sulfate 5 uM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS15745 and SGL_RS15750 are separated by 128 nucleotidesSGL_RS15750 and SGL_RS15755 are separated by 126 nucleotidesSGL_RS15755 and SGL_RS15760 are separated by 45 nucleotides SGL_RS15745: SGL_RS15745 - bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase, at 2,982,289 to 2,983,566 _RS15745 SGL_RS15750: SGL_RS15750 - 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN, at 2,983,695 to 2,984,747 _RS15750 SGL_RS15755: SGL_RS15755 - tRNA-Gly, at 2,984,874 to 2,984,945 _RS15755 SGL_RS15760: SGL_RS15760 - AsnC family protein, at 2,984,991 to 2,986,241 _RS15760 Position (kb) 2983 2984 2985Strain fitness (log2 ratio) -2 -1 0 1 2at 2982.721 kb on - strand, within SGL_RS15745at 2982.790 kb on + strand, within SGL_RS15745at 2983.260 kb on - strand, within SGL_RS15745at 2983.537 kb on + strandat 2983.537 kb on + strandat 2983.764 kb on + strandat 2983.764 kb on + strandat 2983.772 kb on - strandat 2983.772 kb on - strandat 2983.798 kb on - strandat 2983.821 kb on - strand, within SGL_RS15750at 2983.931 kb on - strand, within SGL_RS15750at 2983.959 kb on - strand, within SGL_RS15750at 2983.984 kb on - strand, within SGL_RS15750at 2983.990 kb on - strand, within SGL_RS15750at 2984.062 kb on + strand, within SGL_RS15750at 2984.119 kb on + strand, within SGL_RS15750at 2984.144 kb on - strand, within SGL_RS15750at 2984.198 kb on + strand, within SGL_RS15750at 2984.224 kb on - strand, within SGL_RS15750at 2984.382 kb on - strand, within SGL_RS15750at 2984.410 kb on + strand, within SGL_RS15750at 2984.437 kb on + strand, within SGL_RS15750at 2984.437 kb on + strand, within SGL_RS15750at 2984.445 kb on - strand, within SGL_RS15750at 2984.713 kb on + strandat 2984.769 kb on + strandat 2985.160 kb on - strand, within SGL_RS15760at 2985.358 kb on - strand, within SGL_RS15760at 2985.392 kb on - strand, within SGL_RS15760at 2985.425 kb on + strand, within SGL_RS15760at 2985.427 kb on + strand, within SGL_RS15760at 2985.435 kb on - strand, within SGL_RS15760at 2985.463 kb on + strand, within SGL_RS15760at 2985.647 kb on + strand, within SGL_RS15760

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Per-strain Table

Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM
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2,982,721 - SGL_RS15745 0.34 -2.4
2,982,790 + SGL_RS15745 0.39 -1.6
2,983,260 - SGL_RS15745 0.76 -0.8
2,983,537 + -0.1
2,983,537 + -0.3
2,983,764 + +1.3
2,983,764 + +1.2
2,983,772 - +0.8
2,983,772 - +1.8
2,983,798 - +1.2
2,983,821 - SGL_RS15750 0.12 +0.7
2,983,931 - SGL_RS15750 0.22 +1.6
2,983,959 - SGL_RS15750 0.25 +1.4
2,983,984 - SGL_RS15750 0.27 +1.1
2,983,990 - SGL_RS15750 0.28 +0.7
2,984,062 + SGL_RS15750 0.35 +1.2
2,984,119 + SGL_RS15750 0.40 +1.1
2,984,144 - SGL_RS15750 0.43 +1.1
2,984,198 + SGL_RS15750 0.48 +1.5
2,984,224 - SGL_RS15750 0.50 +1.4
2,984,382 - SGL_RS15750 0.65 +0.8
2,984,410 + SGL_RS15750 0.68 +1.0
2,984,437 + SGL_RS15750 0.70 +1.2
2,984,437 + SGL_RS15750 0.70 +1.0
2,984,445 - SGL_RS15750 0.71 +1.0
2,984,713 + +1.0
2,984,769 + +1.1
2,985,160 - SGL_RS15760 0.14 -0.2
2,985,358 - SGL_RS15760 0.29 -0.2
2,985,392 - SGL_RS15760 0.32 -0.2
2,985,425 + SGL_RS15760 0.35 +0.3
2,985,427 + SGL_RS15760 0.35 +0.4
2,985,435 - SGL_RS15760 0.35 +0.4
2,985,463 + SGL_RS15760 0.38 +0.6
2,985,647 + SGL_RS15760 0.52 +0.3

Or see this region's nucleotide sequence